PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00530g00002.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Dof

Protein Properties

Length: 278aa MW: 30830.4 Da PI: 8.4013

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00530g00002.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.1	1.7e-37	23	81	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +++ lkcprC+s ntkfCyynnyslsqPr+fCk+C+ryWt GG+lrnvPvGgg+rk +k Peaxi162Scf00530g00002.1 23 QQQRLKCPRCESWNTKFCYYNNYSLSQPRHFCKGCKRYWTSGGTLRNVPVGGGCRKINK 81 68999***************************************************766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-25	21	82	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	8.3E-32	25	81	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.341	27	81	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	29	65	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence Send to blast
MENNQVHEES LMMEKFTSQD QQQQQRLKCP RCESWNTKFC YYNNYSLSQP RHFCKGCKRY 60 WTSGGTLRNV PVGGGCRKIN KRIKKPSTTS STSTNHSSTL TPSISTTNTN PSHHIHQAQN 120 DTISPLLYGL LPTYPSNLKF PFPRLFNNSE ICNIDTISGL GFVQDFGTAN SSSLSSSNSI 180 CGSSTLASLI ASNPQQHNFR GLISSYEDLE IPGKNVHSGN GMMSIKMEGD GQNRLVWNLS 240 NHEKIPMEQL NSSDPSLSWT GANLFDPSHM GSSVPSLI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009767955.1	2e-71	PREDICTED: dof zinc finger protein DOF1.4-like
TrEMBL	A0A1U7W121	4e-70	A0A1U7W121_NICSY; dof zinc finger protein DOF1.4-like
STRING	XP_009767955.1	6e-71	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	4e-33	Dof family protein