PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00524g00082.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Dof

Protein Properties

Length: 267aa MW: 30016.7 Da PI: 7.1223

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00524g00082.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	107	1e-33	39	96	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + l+cprC s ntkfCyynny+ sqPr++Ck+C+r+Wt+GG+lrn+PvGggr+++++ Peaxi162Scf00524g00082.1 39 PEPLNCPRCGSINTKFCYYNNYNKSQPRHYCKGCKRHWTAGGTLRNIPVGGGRKNKRT 96 6789***********************************************9776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	7.0E-30	41	95	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	8.0E-21	42	95	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	26.739	42	96	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	44	80	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence Send to blast
MGLSTKLVSI DDHGLDSCQN SLQELPKPPP IRKQPPSKPE PLNCPRCGSI NTKFCYYNNY 60 NKSQPRHYCK GCKRHWTAGG TLRNIPVGGG RKNKRTRPTD HSVDHITGRK YVTLEVNDRR 120 CPLITTTITT PTTSNVSSYT IRGNSIIDEG KKEYDIFYET LNIASSSLPL DHTHFSFSSI 180 GPVPCSVPDY VQSSNAYEYM GKFDGTMEES TITTVMPITS SLSQSWQVQE TSNLVENMPS 240 TYWNWNEIDT LSAADLNIPW DDLEIKP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009624330.1	1e-117	PREDICTED: uncharacterized protein LOC104115407
TrEMBL	A0A1J6IAH2	1e-115	A0A1J6IAH2_NICAT; Dof zinc finger protein pbf
TrEMBL	A0A1S3Z8N7	1e-115	A0A1S3Z8N7_TOBAC; uncharacterized protein LOC107784185
STRING	XP_009624330.1	1e-117	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6171	20	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	2e-26	OBF binding protein 4