PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00518g00318.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family CAMTA
Protein Properties Length: 921aa    MW: 102701 Da    PI: 5.9963
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00518g00318.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1170.23.1e-53141283116
                      CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYa 86 
                               +e + rwl++ e++ iL+n+e  +++++++++p sgs++L+nr+++ryfrkDG+sw+kkkdgk+v E+he+LKvg+ e+l+cyYa
  Peaxi162Scf00518g00318.1  14 REgRFRWLRPAEVLFILQNYEDQQIAHHPPQKPASGSMFLFNRRVLRYFRKDGHSWRKKKDGKAVGEAHERLKVGNAEALNCYYA 98 
                               56689******************************************************************************** PP

                      CG-1  87 hseenptfqrrcywlLeeelekivlvhyle 116
                               h+e+np+fqrr+yw+L+ ++e+ivlvhy++
  Peaxi162Scf00518g00318.1  99 HGENNPNFQRRSYWILDPAYEHIVLVHYRD 128
                               ****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143777.0919135IPR005559CG-1 DNA-binding domain
SMARTSM010763.6E-7212130IPR005559CG-1 DNA-binding domain
PfamPF038591.1E-4717128IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.102.9E-10388475IPR013783Immunoglobulin-like fold
CDDcd001023.45E-6391475No hitNo description
PfamPF018337.4E-9391474IPR002909IPT domain
SuperFamilySSF812961.4E-19391475IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.209.8E-15588685IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029713.681590682IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484035.44E-15593684IPR020683Ankyrin repeat-containing domain
CDDcd002043.20E-13610682No hitNo description
PfamPF127969.4E-7611683IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.179623655IPR002110Ankyrin repeat
SMARTSM0001564740762IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.876741770IPR000048IQ motif, EF-hand binding site
SMARTSM000150.038799821IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.565800829IPR000048IQ motif, EF-hand binding site
PfamPF006120.0031802820IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 921 aa     Download sequence    Send to blast
MADSGGYNIN DLVREGRFRW LRPAEVLFIL QNYEDQQIAH HPPQKPASGS MFLFNRRVLR  60
YFRKDGHSWR KKKDGKAVGE AHERLKVGNA EALNCYYAHG ENNPNFQRRS YWILDPAYEH  120
IVLVHYRDIT EVAAFMSQSS PITPTFSLSS NLYSTQHPGF TVVGSESYQQ YQNESSPGSV  180
EICSDAVINS NGMNVIDITG RLEGVSSSSR VEMSEALRSL KEQLSLNDDN LETEVYSEIE  240
NLDDAENLAY DDGSLVQIHD SSDNLMLQPH SGESSESQHQ LLDLDANMWK EMLDRCRRFP  300
AAESQAKRIE KLDENGMLQN SSGRGPIEET EIDASFTNLY QVDDFKYPAC ARINTYGSNP  360
DQYTTTFDQA RIGTPFEDDM SLTIAQKQKF TIHDVSPDWG YSSEATKVVI VGSFLCNPSE  420
YTWTCMFGDI EVPVQIIKEG AIRCHAPPHL PGKVTLCVTT GNRVSCSELR EFEYRVKLDD  480
HGQNNLPEVG GACNSSEELL LLVRLVQMLL SDSSVQKGDG SESSNDILEK SKASFDTWSQ  540
VIESLLLGTS TSTMTIDWLL QELLKDKLQQ WLSSKLQAKN NQMDGSLSKK EQGIIHTVAG  600
LGLEWALHPI LDAGVSVNFR DINGWTALHW AARFGREKMV ASLIASGAFA GAVTDPSAQD  660
PLGKTAASIA SSCGHKGVAG YLSEVSLTSH LSSLTIEESE LSKGTADVEA ENTISSISTA  720
SAATYEDQLS LKDTLAAVRN AAQAAARIQS AFRAHSFRKR RQREAARAAT TGGDEYAVLS  780
NNALGLSAAS KLAFRNTRDK NSAALVIQKK YRGWKGRKDF LAFRQKVVKI QVRKEYKVCW  840
AAGILEKVVL RWRRRGVGLR GFRLEEEPIE ECEDEDILKV FRKQKVDAAI NEAVSRVLSM  900
VDSPEARQQY HRILEKYRQA K
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016507792.10.0PREDICTED: calmodulin-binding transcription activator 4-like isoform X2
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A1S4D2Z90.0A0A1S4D2Z9_TOBAC; calmodulin-binding transcription activator 4-like isoform X2
STRINGXP_009592002.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39322037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]