PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00498g00054.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 284aa    MW: 32310.8 Da    PI: 10.5221
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00498g00054.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.81.2e-15167213354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               ++h + ErrRR+++N+ f++Lr+llP++     +K +Ka++L  ++eYI+sL
  Peaxi162Scf00498g00054.1 167 VNHMISERRRREKLNDNFQQLRSLLPPS-----TKKDKASVLATTTEYISSL 213
                               58999*********************99.....9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.872164213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.92E-13164218No hitNo description
SuperFamilySSF474592.09E-18164236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.7E-13167213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.8E-18168230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-14170219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MDITNLFSED LSTSRELPSQ PLSTDQYNKP SSSSSSLRSL SIDSPEYSSL LYNVATTSSY  60
VTESPQTEAL PRIQGLQGED AAIRRAYLAV ISSPRQIQGN LPRDYRLATQ KATAFRRFRS  120
ALGPNVPIAT RTCKQNMFKR SIIFFRNINM IRRREHIQMN CPTSTQVNHM ISERRRREKL  180
NDNFQQLRSL LPPSTKKDKA SVLATTTEYI SSLKAQVEEL GKKNEILEAQ LLAPSYKIDQ  240
HGDASFSSGK SGKLAVHITN IIRSKNYRIA IKNYRIWLFI CWNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172177ERRRRE
2173178RRRREK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009793632.15e-76PREDICTED: putative transcription factor bHLH041 isoform X1
RefseqXP_009793633.15e-76PREDICTED: putative transcription factor bHLH041 isoform X2
TrEMBLA0A1U7XNL11e-74A0A1U7XNL1_NICSY; putative transcription factor bHLH041 isoform X1
TrEMBLA0A1U7XRT91e-74A0A1U7XRT9_NICSY; putative transcription factor bHLH041 isoform X2
STRINGXP_009793632.12e-75(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45672339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.13e-23bHLH family protein