PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00422g00012.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 370aa    MW: 40967.7 Da    PI: 5.4558
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00422g00012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.4e-21170220256
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  Peaxi162Scf00422g00012.1 170 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRGE 220
                               59******9.**********965...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.00E-34169229No hitNo description
Gene3DG3DSA:3.30.730.102.7E-32170228IPR001471AP2/ERF domain
SMARTSM003805.8E-38170233IPR001471AP2/ERF domain
PROSITE profilePS5103223.235170227IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-23170228IPR016177DNA-binding domain
PRINTSPR003673.6E-11171182IPR001471AP2/ERF domain
PfamPF008471.9E-14171220IPR001471AP2/ERF domain
PRINTSPR003673.6E-11193209IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MAAAIDMYNN SSNISDPFQE ELMKALEPFM KGASCSSSPS LSPSTYSSPS TSSSSSIYPF  60
GEPNLYTDFN TSPTSCFNYM GAVAESGSLG LNHLTPSQIL QLQAQIQFQN QQQQLLQLQL  120
QQSQQNFNLF NTSGSIYPRN NSKSSMNCLG VRPVPMKQTG GTSLQKATKL YRGVRQRHWG  180
KWVAEIRLPK NRTRLWLGTF DTAEEAALAY DKAAYKLRGE FARLNFPHLR HQLNNELSDF  240
KPLHSSVDAK LQAICQNLAN PKSEELCSNA KSKIKKSKVE ALAASSSVQE CVSKSEITID  300
DSLNGEFSYQ ENGNVKIEAS PSPSPSPYEE SSSSPESDIT FLDFAEPTFD ESENFLLPKY  360
PSVEIDWAAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-22169227160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015073714.11e-150ethylene-responsive transcription factor ERF060-like
TrEMBLM1BUH61e-144M1BUH6_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000531521e-145(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16102471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.19e-53ERF family protein