PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00391g00618.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bZIP | ||||||||
Protein Properties | Length: 273aa MW: 30451.5 Da PI: 6.2345 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.7 | 2.8e-09 | 187 | 234 | 14 | 61 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 R +A rsR RK++ i+eLe+ v++L+ae ++L ele l ++ l + Peaxi162Scf00391g00618.1 187 RQSAHRSRVRKLQHIAELERTVQALQAEGSELSAELEFLDQQNIILSM 234 89***********************************99988765555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.0E-5 | 180 | 238 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.0E-8 | 187 | 232 | No hit | No description |
CDD | cd14703 | 2.46E-15 | 187 | 230 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.2E-10 | 187 | 232 | No hit | No description |
Pfam | PF00170 | 1.3E-6 | 187 | 227 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence Send to blast |
MESSNGSSSL KDFSFTNKQL ILDSTSSPFL QSYADSNVDG QKGKSKLTEG SSASHHHRCN 60 SESFLIEEQP SWLDDLLNEP AETTVVHKGH RRSASDTFAY VGAAAERLNT REEAKNKNVN 120 IGASWGSINY ASYKDLNAVS YETKPSSSHE QNFNKAAQEL NGAASVSHEK HSREVTNSQN 180 QEGSGERQSA HRSRVRKLQH IAELERTVQA LQAEGSELSA ELEFLDQQNI ILSMENRALR 240 QRLDSLSQEQ LIKHCIHLSF MLLFTLPLEF LVS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006350327.1 | 1e-152 | PREDICTED: uncharacterized protein At4g06598-like | ||||
TrEMBL | M1AJA3 | 1e-151 | M1AJA3_SOLTU; Uncharacterized protein | ||||
STRING | PGSC0003DMT400024003 | 1e-152 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11445 | 20 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 1e-42 | bZIP family protein |