PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00391g00424.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Nin-like
Protein Properties Length: 291aa    MW: 32714.6 Da    PI: 6.3571
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00391g00424.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK51.22.4e-16175218548
                    RWP-RK   5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 
                               i+ +dl++ F l+++dAA + gv+ ++LKriCR y ++RWP+ k
  Peaxi162Scf00391g00424.1 175 ITYKDLKQKFGLKLEDAAEDFGVSRSTLKRICRLYDVPRWPSHK 218
                               899**************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151912.992159245IPR003035RWP-RK domain
SuperFamilySSF1097094.05E-5175214No hitNo description
PfamPF020424.9E-16175218IPR003035RWP-RK domain
CDDcd000930.00567178207No hitNo description
PROSITE profilePS5174514.441201289IPR000270PB1 domain
SMARTSM006662.4E-7217289IPR000270PB1 domain
PfamPF005641.7E-12219285IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2403.5E-12220286No hitNo description
SuperFamilySSF542772.03E-12220282No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MDLGMLLDDQ IDSLLNFGMA CDSHPFRNGR GVIGRIFASP AACFCDEVSR FSTSEYPLAR  60
YAHILGLTSC FAICVRSANA GNSVYVLEFY CRKDNKGEQK PLDSILTTMK KHPRSFKVAS  120
GEDIQEETVE VIKFCVPEKC NLLNVETGEI SLALPQNELS TEIYDKEDTK ANFLITYKDL  180
KQKFGLKLED AAEDFGVSRS TLKRICRLYD VPRWPSHKRV KANHSTRIPY LLGEITKRLK  240
LETGTFMVKY LDEDGDWILI TCDTDLGNCI AAAVRSLDKT VITMSIQPVP T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA4897426
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.19e-34Nin-like family protein