PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00382g00051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | ERF | ||||||||
Protein Properties | Length: 202aa MW: 23425.4 Da PI: 5.279 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.7 | 1.6e-14 | 64 | 111 | 3 | 54 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 y+GVr +k +g++ AeIr + + kr +lg+f taeeA++ + a ++++e Peaxi162Scf00382g00051.1 64 YPGVRKRK-WGKFCAEIRSpF-----SkKRMWLGTFNTAEEAYEVYKAKKLEFE 111 99***999.**********66.....34******************99998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.96E-17 | 62 | 110 | No hit | No description |
SMART | SM00380 | 2.0E-8 | 63 | 117 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.85E-14 | 63 | 110 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 16.107 | 63 | 126 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.2E-17 | 63 | 112 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.5E-7 | 64 | 111 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.3E-7 | 64 | 75 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.3E-7 | 86 | 102 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MEKNQEPQQT KIQRKIRVTI SDPDATESSS DEEQETKRPS KRTVYEIVHD HQVIKTAPFS 60 RKLYPGVRKR KWGKFCAEIR SPFSKKRMWL GTFNTAEEAY EVYKAKKLEF EMAKMSKEKE 120 KVAIFEKCEG DVQNSDSSNG IEGKSNVSSE EEQESDDMWM GEWVQISEDK EVKFCLKLGV 180 PIVDNYGFLL GEFSRLDDLS IC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009599132.1 | 7e-66 | PREDICTED: ethylene-responsive transcription factor ERF069-like isoform X1 | ||||
Swissprot | Q9CA27 | 2e-21 | EF118_ARATH; Ethylene-responsive transcription factor ERF118 | ||||
TrEMBL | A0A1J6HS91 | 7e-65 | A0A1J6HS91_NICAT; Ethylene-responsive transcription factor erf118 | ||||
STRING | XP_009599132.1 | 2e-65 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5075 | 15 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 6e-24 | ERF family protein |
Publications ? help Back to Top | |||
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