PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00382g00043.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 394aa    MW: 43291.4 Da    PI: 4.5234
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00382g00043.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-19152200153
                       AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                               s+y+GVr++k +g+W+AeIrd +     + kr++lg++ taeeA +a++  r+++
  Peaxi162Scf00382g00043.1 152 SKYRGVRQRK-WGKWAAEIRDpF-----QsKRIWLGTYNTAEEASQAYEMKRLEF 200
                               89*******9.**********55.....45*******************999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.82E-23152193No hitNo description
PfamPF008475.9E-13152201IPR001471AP2/ERF domain
SuperFamilySSF541713.66E-17152200IPR016177DNA-binding domain
PROSITE profilePS5103220.192153215IPR001471AP2/ERF domain
SMARTSM003803.8E-19153218IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.9E-22153199IPR001471AP2/ERF domain
PRINTSPR003673.7E-10154165IPR001471AP2/ERF domain
PRINTSPR003673.7E-10176192IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MSARLVIFGL CMQQIIYSVS QQSLSQCLSS VSMRLRPIRT CSGVMPEFQK SKKSFETGKA  60
MRKIRIVFND PDATDSSDDE EVIDKKPKRF VREINLPIVG TNDSFSSLKK VLETESSCQD  120
SNNGDKNPKK KRVLAANAKT PKQQLQSKPS SSKYRGVRQR KWGKWAAEIR DPFQSKRIWL  180
GTYNTAEEAS QAYEMKRLEF DALAKSISSN TTNASVSSEK CSNNNKNVGG VCVSEDSAES  240
LVSHTSQSHT SPASVLEMDS LTSGSATVSE VNGKCGQDKA NNVVLDEANV VEQLMGDNMS  300
LAEIGAGMDF DMEMDLFFAG SDDFGQNLDD FAINDFEDLP ICGLEGDVQL PTGLPDFDFD  360
FDFDGYNDSF AYMDETQAQA PLMNGGTPLN IACP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016548314.11e-145PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2G3B6A91e-144A0A2G3B6A9_CAPCH; Uncharacterized protein
STRINGSolyc05g009450.1.11e-133(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.29e-34ERF family protein