PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00380g00618.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family G2-like
Protein Properties Length: 402aa    MW: 44316.9 Da    PI: 7.2078
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00380g00618.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.82.2e-32227282156
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                               k+r++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Peaxi162Scf00380g00618.1 227 KQRRCWSPELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 282
                               79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.875224284IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.0E-29225285IPR009057Homeodomain-like
SuperFamilySSF466893.14E-18225285IPR009057Homeodomain-like
TIGRFAMsTIGR015577.2E-28227282IPR006447Myb domain, plants
PfamPF002498.1E-8229280IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0055062Biological Processphosphate ion homeostasis
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MMINNNHDNR TEKMQRCQQY IDALEEERTK IQVFSRELPL CLELVTQAIE TYKQQLSGTT  60
TETYNLNAHE SDQCSEQTCS DHVPILEEFI PLKRTCSEED EEEEDDDNER VSHKSKTTNT  120
SNTSTSSKNN DKCCKKSDWL RSVQLWNQTS DPTPKEEVTP RQVSVMEVKK NGSGGAFHPF  180
KKEKSASNSA AAAAESPTLT VIPAAAASST AESGGGSKKE DKDSQRKQRR CWSPELHRRF  240
LQALQQLGGS HVATPKQIRE LMKVDGLTND EVKSHLQKYR LHTRRPSPSI HNNNNQQPPQ  300
FVVVGGIWVP PPEYAAMAAA APAASGEASG VAHSNGIYAP IATLPKGPFQ DGTLKQRQHI  360
SNKPLRRSEE RGCGSHSDGG VHSNSPATSN SSTHTTTASP AY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-13227280255Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-13227280255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-13227280255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-13227280255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-13227280255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-13227280255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-13227280255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-13227280255Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in phosphate homeostasis. Involved in the regulation of the developmental response of lateral roots, acquisition and/or mobilization of phosphate and expression of a subset of genes involved in phosphate sensing and signaling pathway. Is a target of the transcription factor PHR1. {ECO:0000269|PubMed:27016098}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00218DAPTransfer from AT1G68670Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced under phosphate deprivation conditions. {ECO:0000269|PubMed:27016098}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016548806.10.0PREDICTED: transcription factor LUX
SwissprotQ8VZS34e-96HHO2_ARATH; Transcription factor HHO2
TrEMBLA0A1U8EQX21e-180A0A1U8EQX2_CAPAN; transcription factor LUX
STRINGXP_009788853.11e-171(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52192438
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.15e-78G2-like family protein
Publications ? help Back to Top
  1. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]
  2. Sun X, et al.
    The GARP/MYB-related grape transcription factor AQUILO improves cold tolerance and promotes the accumulation of raffinose family oligosaccharides.
    J. Exp. Bot., 2018. 69(7): p. 1749-1764
    [PMID:29385617]