PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00362g00156.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Nin-like
Protein Properties Length: 941aa    MW: 104841 Da    PI: 6.8618
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00362g00156.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK91.66.1e-29621671252
                    RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                               ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++
  Peaxi162Scf00362g00156.1 621 EKSISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 671
                               799**********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.450.409.2E-4216302IPR029016GAF domain-like
PROSITE profilePS5151917.359610691IPR003035RWP-RK domain
PfamPF020421.1E-24624671IPR003035RWP-RK domain
SuperFamilySSF542771.15E-20835929No hitNo description
Gene3DG3DSA:3.10.20.2402.8E-20841924No hitNo description
PfamPF005642.1E-15843925IPR000270PB1 domain
SMARTSM006661.0E-22843926IPR000270PB1 domain
PROSITE profilePS5174520.717843926IPR000270PB1 domain
CDDcd064071.30E-38844925No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 941 aa     Download sequence    Send to blast
MEDGAFTLND MFARLSDNTT TTTTDFGLMG EFFYDGFRLE TTERSNFCQP LPFTAASLAS  60
QPFLFSTLDT TLGHPLPTTD QVTLQEDTEI DKVVDNLFAQ MDEFSATRRE ASPPPDSSGQ  120
PSGFQVEGTQ MNKRLWIRPN RNPSPTLSVK KRLVQAIEYL KDSTRNKDVL IQIWVPVKRG  180
GKHVLITNNQ PYSLNPNSRS LVEYRYVSQN YQFAAEKDSK EFVGLPGRVF LKKLPEWTPD  240
VRYFKREEYP RVNYAHQHNV RGSIAIPVFE SGSGTCLGVV EIVTTTQKTH YHPELEDVCR  300
ALEDYNESYQ AALAEIQYIL TCVCDTHKLP LAQTWAPCIQ QGKSGCLHSD ENVASCVSTV  360
DSACYVRDPQ VLPFHFACSE QHLLKGEGVA GGAFNTNQPC FATDITAFSK TEYPLSHHAR  420
MFGLCSAVAI RLRSIYTGLA DFVLEFFLPL DCKNTEDQKR MLSSLSSVIQ QNCQSLRVVT  480
DQELQVEKEL LPREKVSLPV GGSHEEESRK PVSPPYRDPS DQDASSWITQ MMDAQRKGKE  540
PAVSLENHKD EQEENFKVTA THWDYTQRES VHASTFSEPN QMQENFGPEG GSGGSLDFSS  600
VSGSHSSGAK RAGERRRSKT EKSISLQVLR QYFAGSLKDA AKSIGVCPTT LKRICRQHGI  660
TRWPSRKIKK VGHSLQKLQL VIDSVHGAEG SIKLSSFYSN FPELSSPNKP GTSNISASKN  720
HDHLHQVNTQ PDGSIISPGT TTSKSTSSSG SHNSSPSLFG STGSKHLFPL GNVFTTGNAL  780
AVEHPGGMLK RARTDAELHD VGQEETKLMD RSQSQMIQKD RFSLEPLHPL ATSSNQILRD  840
SATFKIKAIF GKEKVRFSLQ SHWGFGDVQH EVLRRFNVED VGKIDLKYLD DDDEWVLLTC  900
DADLEECIDI HRLAKRRTIK VSLHHACHPN LGSSFGSSGP A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1911920RLAKRRTIKV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009623517.10.0PREDICTED: protein NLP2-like
RefseqXP_016493353.10.0PREDICTED: protein NLP2-like
RefseqXP_018632685.10.0PREDICTED: protein NLP2-like
TrEMBLA0A1S4BWX70.0A0A1S4BWX7_TOBAC; protein NLP2-like
STRINGXP_009623517.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35270.10.0Nin-like family protein