PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00351g00112.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | NAC | ||||||||
Protein Properties | Length: 167aa MW: 19057 Da PI: 9.9497 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 163.2 | 9.6e-51 | 14 | 139 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 ppG+rFhP+deel+v+yL +kv++++l++ +i+ev++y+++PwdLp+ + +e+ew+fFs+rd+ky++g r+nr+t+sgyWkat Peaxi162Scf00351g00112.1 14 PPGVRFHPSDEELIVHYLLNKVNSHPLPA-AIIAEVELYNYNPWDLPRLALFGEDEWFFFSPRDRKYPNGVRPNRTTSSGYWKAT 97 9****************************.88***************76667899****************************** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 g+dk++ls+ g+ +g+kk Lvfy+g+apkg+ktdW+m eyrl Peaxi162Scf00351g00112.1 98 GTDKPILSSIGSRIGVKKALVFYTGKAPKGVKTDWIMIEYRL 139 *********99*****************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.7E-57 | 7 | 144 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 52.059 | 13 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.3E-26 | 14 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MAPFEIPLSS FHFPPGVRFH PSDEELIVHY LLNKVNSHPL PAAIIAEVEL YNYNPWDLPR 60 LALFGEDEWF FFSPRDRKYP NGVRPNRTTS SGYWKATGTD KPILSSIGSR IGVKKALVFY 120 TGKAPKGVKT DWIMIEYRLP DRAIQPSRSA GSMRVSLIIN HLLFLNQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 8e-64 | 7 | 167 | 11 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 8e-64 | 7 | 167 | 11 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 8e-64 | 7 | 167 | 11 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 8e-64 | 7 | 167 | 11 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 8e-64 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
3swm_B | 8e-64 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
3swm_C | 8e-64 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
3swm_D | 8e-64 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
3swp_A | 8e-64 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
3swp_B | 8e-64 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
3swp_C | 8e-64 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
3swp_D | 8e-64 | 7 | 167 | 14 | 169 | NAC domain-containing protein 19 |
4dul_A | 8e-64 | 7 | 167 | 11 | 166 | NAC domain-containing protein 19 |
4dul_B | 8e-64 | 7 | 167 | 11 | 166 | NAC domain-containing protein 19 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027108046.1 | 5e-86 | NAC domain-containing protein 102-like | ||||
Swissprot | Q8GY42 | 5e-66 | NAC25_ARATH; NAC transcription factor 25 | ||||
TrEMBL | A0A068UFT8 | 1e-84 | A0A068UFT8_COFCA; Uncharacterized protein | ||||
STRING | XP_006488646.1 | 7e-79 | (Citrus sinensis) | ||||
STRING | EOY33050 | 3e-78 | (Theobroma cacao) | ||||
STRING | XP_006424612.1 | 8e-79 | (Citrus clementina) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13390 | 11 | 17 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 2e-68 | NAC domain containing protein 25 |