PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00341g00027.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

CPP

Protein Properties

Length: 975aa MW: 105343 Da PI: 7.3909

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00341g00027.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.7	3e-15	554	592	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCkk+kClk+YC+Cfaag +C+ +C+C++C N+ e Peaxi162Scf00341g00027.1 554 CKRCNCKKTKCLKLYCDCFAAGIYCAGSCTCQGCLNRPE 592 79**********************************876 PP
2	TCR	47.1	4.7e-15	641	678	1	38
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkN 38 ++k+gCnCkks C+kkYCeC++a++ Cs+ C+Ce+CkN Peaxi162Scf00341g00027.1 641 RHKRGCNCKKSMCQKKYCECYQANVGCSNGCRCEGCKN 678 589**********************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	3.6E-13	552	593	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	33.387	553	681	IPR005172	CRC domain
Pfam	PF03638	3.3E-11	555	590	IPR005172	CRC domain
SMART	SM01114	3.1E-14	641	682	IPR033467	Tesmin/TSO1-like CXC domain
Pfam	PF03638	2.9E-10	643	678	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 975 aa Download sequence Send to blast
MVHAGCSKVY EVFPPSMCFS YFCLFWSQDS PVFTYISNLS PIQPVKGATV VQGFPGLNSP 60 PLVFTSPRFN VHSRSSFLKR SHFPQLSSEA FSGKNDDYND TTTDSDGTGL SVSQLRSEQS 120 PSVQKVSDNN ISVHKQSGSL VRCADEFLVD VSNSESGNPS NLTNPSPKEA DNIPQSPNTA 180 AESKESVANL GNKDDARKDK IQNDAAFAVV EKAEEDNKGK CSSDQKFIGF NSSNIDSDFS 240 SPDLCAKIEP NLPADSSLHH HYGDHCMAQL SRADHPMLDE TSIQTKPLET AHDCRDNIDK 300 INTASSADES NVQHDSQTKA GQHQSGIRRR CLQFEDAQQK IAPTSSCSQN ASGTVGFPGP 360 PVSPAFSEVV ESVSSNRSST ASNSLLTQLE SSSDNSGSFA VKVPKPSGIG LHLNSILNAM 420 HAGSGATVSV KSAERGNLSI RGKKLASMMS CHPSENIKKC LISNVVGGNM TSDDGKLESD 480 ASNADNFAAS LSLSNAKHLS DTALLRPTEH TSSHKRKSNS GYIDSSMNYN QSSPKKKRQA 540 CLKKPPDAND VDGCKRCNCK KTKCLKLYCD CFAAGIYCAG SCTCQGCLNR PEYEDTVLDV 600 RQQIQSRNPL AFVSKIVQRP TDLPSNILQE DGASFTPSSA RHKRGCNCKK SMCQKKYCEC 660 YQANVGCSNG CRCEGCKNIY GVKEEYGKEL VNKHCITERL ERSVGEKVEM VTATSGLLQS 720 DPSNRCNLTP LTPSFHCSDR GKNASNSWFT PGKYLSLPES GQAITAAYGL SPGSPRSSTN 780 HDINQQTACD ILDLVTFDPD FNISNAKLAN EFSPVFHVPS NMVDLSALSK SQDWASNSGG 840 QLFPRTVQSQ PTRPSCWRNS PMTPMTQFDG SGMNALESLD SDKKSNVIED DTPEILKDSS 900 VPLRGVKVSS PNKKRVSPPH CHLNEVGSSS SGRGLTSRKF ILQAVPLFPP LTPCIGSKDV 960 AAHNTDNCQK DSSSK

Sequence ? help Back to Top

Protein Sequence Length: 975 aa Download sequence Send to blast

MVHAGCSKVY EVFPPSMCFS YFCLFWSQDS PVFTYISNLS PIQPVKGATV VQGFPGLNSP  60
PLVFTSPRFN VHSRSSFLKR SHFPQLSSEA FSGKNDDYND TTTDSDGTGL SVSQLRSEQS  120
PSVQKVSDNN ISVHKQSGSL VRCADEFLVD VSNSESGNPS NLTNPSPKEA DNIPQSPNTA  180
AESKESVANL GNKDDARKDK IQNDAAFAVV EKAEEDNKGK CSSDQKFIGF NSSNIDSDFS  240
SPDLCAKIEP NLPADSSLHH HYGDHCMAQL SRADHPMLDE TSIQTKPLET AHDCRDNIDK  300
INTASSADES NVQHDSQTKA GQHQSGIRRR CLQFEDAQQK IAPTSSCSQN ASGTVGFPGP  360
PVSPAFSEVV ESVSSNRSST ASNSLLTQLE SSSDNSGSFA VKVPKPSGIG LHLNSILNAM  420
HAGSGATVSV KSAERGNLSI RGKKLASMMS CHPSENIKKC LISNVVGGNM TSDDGKLESD  480
ASNADNFAAS LSLSNAKHLS DTALLRPTEH TSSHKRKSNS GYIDSSMNYN QSSPKKKRQA  540
CLKKPPDAND VDGCKRCNCK KTKCLKLYCD CFAAGIYCAG SCTCQGCLNR PEYEDTVLDV  600
RQQIQSRNPL AFVSKIVQRP TDLPSNILQE DGASFTPSSA RHKRGCNCKK SMCQKKYCEC  660
YQANVGCSNG CRCEGCKNIY GVKEEYGKEL VNKHCITERL ERSVGEKVEM VTATSGLLQS  720
DPSNRCNLTP LTPSFHCSDR GKNASNSWFT PGKYLSLPES GQAITAAYGL SPGSPRSSTN  780
HDINQQTACD ILDLVTFDPD FNISNAKLAN EFSPVFHVPS NMVDLSALSK SQDWASNSGG  840
QLFPRTVQSQ PTRPSCWRNS PMTPMTQFDG SGMNALESLD SDKKSNVIED DTPEILKDSS  900
VPLRGVKVSS PNKKRVSPPH CHLNEVGSSS SGRGLTSRKF ILQAVPLFPP LTPCIGSKDV  960
AAHNTDNCQK DSSSK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5fd3_A	2e-15	555	679	12	121	Protein lin-54 homolog
5fd3_B	2e-15	555	679	12	121	Protein lin-54 homolog
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016537847.1	0.0	PREDICTED: uncharacterized protein LOC107839029
TrEMBL	A0A2G2YX66	0.0	A0A2G2YX66_CAPAN; Uncharacterized protein
STRING	XP_009591884.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6980	21	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	4e-54	TESMIN/TSO1-like CXC 2