PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00330g00006.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Dof
Protein Properties Length: 344aa    MW: 37074.1 Da    PI: 9.7945
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00330g00006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof119.71e-3777136362
                    zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                               e+a+kcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+ss
  Peaxi162Scf00330g00006.1  77 EAAQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSS 136
                               6789*****************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-3360131IPR003851Zinc finger, Dof-type
PfamPF027016.0E-3279134IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.99480134IPR003851Zinc finger, Dof-type
PROSITE patternPS01361082118IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MVFSSISAYL DPANWQQQAG YSISNPQLPS APSQHVPPPS LPCPVQQAQP HVGGGGSSIR  60
PGSMADRARL ANIPMAEAAQ KCPRCESTNT KFCYFNNYSL SQPRHFCKTC RRYWTRGGAL  120
RSVPVGGGCR RNKRSSNSTT KATSNNTSKS PASSNSTGNR QPTNSGSTSN NNSFSSPSSA  180
ASLLGLMTPQ IPPLRFMSPL GQLTDHHFTP NDNLTMNYSA LSSSAPIVGT NNQSMNFQLG  240
MGSNVDQWRL QQQILANQFP NFYGGLDSST TSGLYPFQGG FEIRPKISNP MLSQLAAMKM  300
EENQDHSNLS RQFLGIQGNE TWSNGSAWNE LSASISSSST SNAL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00295DAPTransfer from AT2G37590Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009627605.11e-154PREDICTED: dof zinc finger protein DOF2.4-like
RefseqXP_016510281.11e-154PREDICTED: dof zinc finger protein DOF2.4-like
TrEMBLA0A1S4DA641e-153A0A1S4DA64_TOBAC; dof zinc finger protein DOF2.4-like
STRINGXP_009627605.11e-153(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19172463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.12e-48DNA binding with one finger 2.4