PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00304g00518.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bZIP
Protein Properties Length: 344aa    MW: 37950.9 Da    PI: 6.4444
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00304g00518.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.1e-10145201561
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                               kr++r   NR +A+rs +RK  +i eLe+kv++L++e ++L  +l   +    + ++
  Peaxi162Scf00304g00518.1 145 KRAKRILANRQSASRSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTQFTN 201
                               9*****************************************999877766666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-16141205IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.737143206IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.61E-10145196No hitNo description
PfamPF001708.8E-9145193IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-8145199No hitNo description
CDDcd147035.87E-22146195No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MQDPSNPNNS KTPSFSSTFR PPHHRRAHSE VNFRLPEDLD LGSDPFDGSG TGSFEEIGSE  60
DDFFSTYMDI EKLGSGSNPN DISGFSNNAG GGGSSGHVAD GGVMRPRHRH SNSVDSSSLL  120
LSESIEAKKA MAPDKLAELW TIDPKRAKRI LANRQSASRS KERKARYITE LERKVQTLQT  180
EATTLSAQLT LFQRDTTQFT NENTELKLRL QAMAQQAQLR DALNEALKQE VERLRMATGE  240
MSSSSDAYNL GMQHIPYNQS AFFSHQPQSG PSESQNIQMQ QFQSLQDSLL TPHRRLLSGH  300
QALPDTMQQD PLGRFQGLDI GGRGMHLVKT EAPSISASES SSTL
Functional Description ? help Back to Top
Source Description
UniProtTranscrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00303DAPTransfer from AT2G40620Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754451e-109HG975445.1 Solanum pennellii chromosome ch06, complete genome.
GenBankHG9755181e-109HG975518.1 Solanum lycopersicum chromosome ch06, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004240847.10.0transcription factor RF2b
RefseqXP_015080176.10.0transcription factor RF2b
SwissprotO228731e-111BZP18_ARATH; bZIP transcription factor 18
TrEMBLA0A3Q7GUZ50.0A0A3Q7GUZ5_SOLLC; Uncharacterized protein
STRINGSolyc06g048630.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34252349
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.19e-88bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Pawar V, et al.
    A novel family of plant nuclear envelope-associated proteins.
    J. Exp. Bot., 2016. 67(19): p. 5699-5710
    [PMID:27630107]
  3. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  5. Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
    Efficient gene tagging in Arabidopsis thaliana using a gene trap approach.
    Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7
    [PMID:9356517]