PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00301g00122.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 254aa    MW: 28351.7 Da    PI: 4.9316
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00301g00122.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.5e-1871121256
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+ +++g+
  Peaxi162Scf00301g00122.1  71 IYHGVRKRT-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAAIAIKGH 121
                               69****887.**********843...6**********************999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.67E-3270130No hitNo description
PfamPF008471.9E-1270121IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-3171129IPR001471AP2/ERF domain
SMARTSM003809.9E-3571134IPR001471AP2/ERF domain
PROSITE profilePS5103222.35271128IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-2171129IPR016177DNA-binding domain
PRINTSPR003675.7E-107283IPR001471AP2/ERF domain
PRINTSPR003675.7E-1094110IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MAEETLIFNN TDNPKPSNFT NSSTSTPCSP LTKRPNLEAD KQETKKKTKY SDIECDSHNM  60
NKKIDDLKHP IYHGVRKRTW GKWVSEIREP RKKSRIWLGT FATAEMAARA HDVAAIAIKG  120
HLAVLNFPEL AHLFPKPAST CAKDIQSTAA KAAALDIPSI SCISEQSQGE LIEETEDSIR  180
ESSSSTSSLR SNEDPFLDLP DLLLDLSQQI DKCCDYNSPI WELAGAESND SSHSEFWPQD  240
LYLLDYSYGT VLDA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-18691281272Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016432455.14e-96PREDICTED: ethylene-responsive transcription factor ERF038-like
SwissprotQ8LBQ75e-43ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLA0A1S3WXP58e-95A0A1S3WXP5_TOBAC; ethylene-responsive transcription factor ERF038-like
STRINGXP_009610624.16e-95(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-36ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]