PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00264g00840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | BES1 | ||||||||
Protein Properties | Length: 183aa MW: 20917.6 Da PI: 7.8924 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 127.7 | 1.4e-39 | 37 | 169 | 4 | 139 |
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasa 88 r p+ +Er +nk+RE +RRa+a ki+aGLRa+Gnyklpk+aD n+ lkALc+eAGw ve+DGt y+k + + +a++ Peaxi162Scf00264g00840.1 37 FRYPSDRERQKNKQREQKRRAVAHKIFAGLRAHGNYKLPKHADTNDLLKALCEEAGWHVEEDGTIYKKNPVRDMPRLIEADFAQV 121 5899***************************************************************998888777788888888 PP DUF822 89 spesslqsslkssalaspvesysaspksssfpspssldsislasaasllpv 139 s e +++ + ++ + + e y + + ++ p +++++ ++ s++p+ Peaxi162Scf00264g00840.1 122 SMEDDSK-DTDKCEDQIKDEDYCKCEVDTNMVTPRNTETTLAE--GSFTPF 169 8888876.66667777777777777777777777776666554..444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 3.9E-35 | 38 | 116 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence Send to blast |
MVGEKRTSQV LRGCIKTSRG PWLVHRTAKD GSVVTRFRYP SDRERQKNKQ REQKRRAVAH 60 KIFAGLRAHG NYKLPKHADT NDLLKALCEE AGWHVEEDGT IYKKNPVRDM PRLIEADFAQ 120 VSMEDDSKDT DKCEDQIKDE DYCKCEVDTN MVTPRNTETT LAEGSFTPFV EVSNINLTLS 180 LSS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 8e-16 | 38 | 105 | 372 | 439 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 8e-16 | 38 | 105 | 372 | 439 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 8e-16 | 38 | 105 | 372 | 439 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 8e-16 | 38 | 105 | 372 | 439 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975449 | 2e-95 | HG975449.1 Solanum pennellii chromosome ch10, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009797386.1 | 3e-97 | PREDICTED: protein BRASSINAZOLE-RESISTANT 2-like | ||||
TrEMBL | A0A1U7Y5Z4 | 8e-96 | A0A1U7Y5Z4_NICSY; protein BRASSINAZOLE-RESISTANT 2-like | ||||
STRING | XP_009797386.1 | 1e-96 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6204 | 21 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19350.6 | 9e-20 | BES1 family protein |