PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00264g00088.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 468aa    MW: 53215.6 Da    PI: 4.4509
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00264g00088.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-1872129255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpseng...kr..krfslgkfgtaeeAakaaiaarkkleg 55 
                                y+GVr++  +g+WvAeIr+p++++   k   kr +lg+f  a eAa a+++a+k  +g
  Peaxi162Scf00264g00088.1  72 IYRGVRQRT-WGKWVAEIREPVTRNsqyKGngKRLWLGTFPNAVEAALAYDEAAKIVHG 129
                               69****999.**********999555883369**********************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.06E-2871138No hitNo description
PfamPF008471.0E-1171125IPR001471AP2/ERF domain
SMARTSM003804.3E-3172143IPR001471AP2/ERF domain
PROSITE profilePS5103221.78672137IPR001471AP2/ERF domain
SuperFamilySSF541712.68E-1972138IPR016177DNA-binding domain
PRINTSPR003671.0E-87384IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.9E-2773138IPR001471AP2/ERF domain
PRINTSPR003671.0E-8103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MYACCDNRKQ KRRRNGSDSI KEILLRWKNH SQEINASTTL DEQVKRKRKM PVKRSRKGCM  60
RGKGGPENPE CIYRGVRQRT WGKWVAEIRE PVTRNSQYKG NGKRLWLGTF PNAVEAALAY  120
DEAAKIVHGS NAILNFPDYC VESSGLQNAS SSHVAVTFNR MSSLDSDQSS VDHENSGVND  180
AEVEVELPLE VSNKPDDGLV INEENKNDVD DEETEILRYI QECLQEKQHS SPYCLTEESV  240
VDPKDDWQND LDDSGCSFRI DSKPSSSCVK VETLIKEEFE KDEIVHENDL ERVNSNEVSN  300
SLCSIHEMTD VSKDVFKPDE ICNSNDQIVP QGLANNCLLN TLQEQALDCS SSGNLSEDVR  360
NHLEWIEKWL MEDDISEEAI KIFDTKYGDE VYTIERFLEE PFDDFKPMMV PQESSKLNYF  420
KNEELFDCTN NQQIDQQNPE TNAEHNSDGK HNLNAHGLGD IGVGKAQS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-1873137360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A2e-1873137663ATERF1
3gcc_A2e-1873137663ATERF1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1613NRKQKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009803153.11e-145PREDICTED: uncharacterized protein LOC104248568
RefseqXP_016462903.11e-145PREDICTED: uncharacterized protein LOC107785980
TrEMBLA0A1S3ZEN71e-143A0A1S3ZEN7_TOBAC; uncharacterized protein LOC107785980
TrEMBLA0A1U7YJ501e-143A0A1U7YJ50_NICSY; uncharacterized protein LOC104248568
STRINGXP_009803153.11e-144(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA79651530
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.15e-33ERF family protein