PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00213g00121.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

HD-ZIP

Protein Properties

Length: 705aa MW: 77220.7 Da PI: 5.5323

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00213g00121.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21	5.8e-07	30	58	17	45
HHHHHSSS--HHHHHHHHHHCTS-HHHHH CS Homeobox 17 elFeknrypsaeereeLAkklgLterqVk 45 ++F++n++p+++ +eeLAkklg+ ++qVk Peaxi162Scf00213g00121.1 30 NAFKENPHPDKKIIEELAKKLGMGTKQVK 58 58**************************8 PP
2	START	167.6	8.4e-53	211	431	2	203
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla 77 la +a++el+++a+ ++p+Wv+s e + +e++++f++ + +++ea +as++v+ ++ +lve+l+d + +W e++ Peaxi162Scf00213g00121.1 211 LAVAAMNELLRLAEIGKPLWVRSLdeggETLSLEEYVSSFTPCTGikpryFTTEATKASAIVIINSLTLVETLMDGS-RWVEMFS 294 6789******************9999999999999999998779***************************.*** PP .......EEEEEEEECTT...EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEE CS START 78 .......kaetlevissg...galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSg 151 +a+++ s g g+l l+++e+q ls lvp R++ f+R+++q+ +g w++vdvSvds q+ ++ ++ +++lpSg Peaxi162Scf00213g00121.1 295 cnvgktsAADVISSCSIGswsGTLKLIQTEFQILSDLVPvRKVKFLRFCKQHAEGLWAVVDVSVDSIQEGSQPGEIGNCRRLPSG 379 77777777777777************************************************9777899**** PP EEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXX CS START 152 iliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrq 203 ++i++++ng+sk+tw+eh++++++++h l+r+lv++gl +ga++w+atlqr Peaxi162Scf00213g00121.1 380 CIIQDMPNGYSKITWIEHMEYNESVVHHLYRPLVRNGLGFGAQRWMATLQRM 431 ************************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00086	2.22E-6	30	58	No hit	No description
Pfam	PF00046	2.0E-4	30	58	IPR001356	Homeobox domain
Gene3D	G3DSA:1.10.10.60	5.3E-5	30	58	IPR009057	Homeodomain-like
PROSITE profile	PS50848	37.713	201	437	IPR002913	START domain
SuperFamily	SSF55961	8.24E-28	202	433	No hit	No description
CDD	cd08875	1.29E-106	205	433	No hit	No description
SMART	SM00234	2.7E-34	210	434	IPR002913	START domain
Pfam	PF01852	1.2E-45	211	431	IPR002913	START domain
SuperFamily	SSF55961	5.91E-7	479	699	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0008289	Molecular Function	lipid binding

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence Send to blast
MAGHSDMSEK GESSNDVVSG RPSEDENESN AFKENPHPDK KIIEELAKKL GMGTKQVKSQ 60 SEKHEHELLK QQNDELRLEK ITLEEAMKNP VCNRCGSQAS LTDVNIDEHQ AKIEHEHLKN 120 EVKSITLLAK KLLVPLASLE ESTHSVMANS ESVFAAGKNG FGGINSVETQ LPTGIDLNND 180 PPTPLPVTPP QPTTRLANID VSYDKSKLMD LAVAAMNELL RLAEIGKPLW VRSLDEGGET 240 LSLEEYVSSF TPCTGIKPRY FTTEATKASA IVIINSLTLV ETLMDGSRWV EMFSCNVGKT 300 SAADVISSCS IGSWSGTLKL IQTEFQILSD LVPVRKVKFL RFCKQHAEGL WAVVDVSVDS 360 IQEGSQPGEI GNCRRLPSGC IIQDMPNGYS KITWIEHMEY NESVVHHLYR PLVRNGLGFG 420 AQRWMATLQR MSEFKAVMMS PVNATGDHAG SDEVPYVAVV CSSGRRSIAV LAQRMARSFC 480 GGVCATLHKW DPIQEADGED ARLMVRRNIG DPGELTGVIL SATKTIWLPV KQHRLIEFLL 540 NKEKRSQWDV SYSDPLKHMV DIAKGQNLDN NISLFRAVED DTNADQNSKL ILQDTSSDAT 600 GFLLVYATID TSAMNVVMDG GDSSSVAFLP SGISIVPDYF QDFSSASNST GTSHGFSCTG 660 SLVTIGFQIL VNSLPTAKLK IQSVKKVNDL IARTIKGIRA AFECE

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence Send to blast

MAGHSDMSEK GESSNDVVSG RPSEDENESN AFKENPHPDK KIIEELAKKL GMGTKQVKSQ  60
SEKHEHELLK QQNDELRLEK ITLEEAMKNP VCNRCGSQAS LTDVNIDEHQ AKIEHEHLKN  120
EVKSITLLAK KLLVPLASLE ESTHSVMANS ESVFAAGKNG FGGINSVETQ LPTGIDLNND  180
PPTPLPVTPP QPTTRLANID VSYDKSKLMD LAVAAMNELL RLAEIGKPLW VRSLDEGGET  240
LSLEEYVSSF TPCTGIKPRY FTTEATKASA IVIINSLTLV ETLMDGSRWV EMFSCNVGKT  300
SAADVISSCS IGSWSGTLKL IQTEFQILSD LVPVRKVKFL RFCKQHAEGL WAVVDVSVDS  360
IQEGSQPGEI GNCRRLPSGC IIQDMPNGYS KITWIEHMEY NESVVHHLYR PLVRNGLGFG  420
AQRWMATLQR MSEFKAVMMS PVNATGDHAG SDEVPYVAVV CSSGRRSIAV LAQRMARSFC  480
GGVCATLHKW DPIQEADGED ARLMVRRNIG DPGELTGVIL SATKTIWLPV KQHRLIEFLL  540
NKEKRSQWDV SYSDPLKHMV DIAKGQNLDN NISLFRAVED DTNADQNSKL ILQDTSSDAT  600
GFLLVYATID TSAMNVVMDG GDSSSVAFLP SGISIVPDYF QDFSSASNST GTSHGFSCTG  660
SLVTIGFQIL VNSLPTAKLK IQSVKKVNDL IARTIKGIRA AFECE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016449095.1	0.0	PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
TrEMBL	A0A1J6IMV4	0.0	A0A1J6IMV4_NICAT; Homeobox-leucine zipper protein anthocyaninless 2
STRING	XP_009589494.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15318	3	7

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61150.1	0.0	homeodomain GLABROUS 1