PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00207g01048.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 291aa    MW: 32034.4 Da    PI: 6.9612
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00207g01048.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.27.8e-051832231055
                               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               r R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  Peaxi162Scf00207g01048.1 183 RVRKEKLGDRITALHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 223
                               7788899999999****9998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.617173222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-4179228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-11182233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.04E-6182227No hitNo description
Gene3DG3DSA:4.10.280.104.6E-8183230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MAGNPTNWWN MLMNGNMHPQ SQEHLSSSTS SNFYGASNSL AENPNQDIPR SWSQLLLPFH  60
QENLEDQSLN SVHPSTNFRV PVADVKPELG QLYGYHHRVE NEFQSSLQEK LELPTNFTKH  120
TTHWSHQDMP SPASSCITTG LNHNVLNFSS NKSSKEEHKN QHPADHSSEC NSTSSGGISK  180
KARVRKEKLG DRITALHQLV SPFGKTDTAS VLSEAIGYIR FLQGQIQALS SPYIGNVSGS  240
MGHIPQQSDS QHKEKDLRSR GLCLVPISCM QNVGSDTGAD YWAPALGGGG F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754454e-33HG975445.1 Solanum pennellii chromosome ch06, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009608011.11e-155PREDICTED: transcription factor bHLH68-like isoform X1
SwissprotQ8S3D13e-48BH068_ARATH; Transcription factor bHLH68
TrEMBLA0A1S4A5761e-152A0A1S4A576_TOBAC; transcription factor bHLH68-like isoform X1
STRINGXP_009608011.11e-154(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15192247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.12e-48bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Le Hir R, et al.
    AtbHLH68 transcription factor contributes to the regulation of ABA homeostasis and drought stress tolerance in Arabidopsis thaliana.
    Physiol Plant, 2017. 160(3): p. 312-327
    [PMID:28369972]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]