PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00205g00820.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family HSF
Protein Properties Length: 69aa    MW: 8017.3 Da    PI: 4.065
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00205g00820.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind48.91.7e-151768353
                              HHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHH CS
              HSF_DNA-bind  3 lkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSF 53
                              l k+ye++ede+++ lisws e+ nsf+++d  +f++++LpkyFk s++a F
  Peaxi162Scf00205g00820.1 17 LVKVYEMVEDESTDPLISWSsESDNSFIIWDVPKFSSELLPKYFKFSSIAVF 68
                              679*****************7778***********************99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004150.0086969IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000564.9E-71639IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.109.9E-141768IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467851.54E-111768IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004477.0E-121868IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000564.9E-75567IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
MVKSFENVAP LPFMFILVKV YEMVEDESTD PLISWSSESD NSFIIWDVPK FSSELLPKYF  60
KFSSIAVFL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds DNA of heat shock promoter elements (HSE). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009770996.18e-23PREDICTED: heat stress transcription factor A-8
RefseqXP_016505243.18e-23PREDICTED: heat stress transcription factor A-8
SwissprotQ6K6S53e-15HSFA5_ORYSJ; Heat stress transcription factor A-5
TrEMBLA0A1S4CVV82e-21A0A1S4CVV8_TOBAC; heat stress transcription factor A-8
TrEMBLA0A1U7W1C22e-21A0A1U7W1C2_NICSY; heat stress transcription factor A-8
STRINGXP_009770996.13e-22(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57224113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-16heat shock transcription factor A2
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]