PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00184g00416.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bZIP
Protein Properties Length: 307aa    MW: 33281 Da    PI: 5.8404
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00184g00416.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.95.3e-09207265563
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                               kr++r   NR +A rs +RK  +i+eLe+k ++L++  ++L  +l  l+     +++e+
  Peaxi162Scf00184g00416.1 207 KRAKRIWANRQSAARSKERKMRYIAELERKLQALQTDATTLSAQLTLLQRDTNGMTAEN 265
                               9********************************************99998877777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-14203267IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.277205268IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.68E-10207257No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-7207260No hitNo description
PfamPF001701.3E-7207261IPR004827Basic-leucine zipper domain
CDDcd147031.58E-23208257No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MDKSSNHGAG LLPPSGSGRY SLFSPPGVKS EPNLPPLGPS GNSSDQSGHF DSSRFSHDIS  60
RMPDNPPKNL GHRRAHSEIL TLPDDISFDS DLGVVGGLDG PSLSDETEED FFSMYLDMDK  120
FNSSSATSTF QVGESSSSAA AASGTENVAP VIREKPRIRH QHSQSMDGST TIKPEMLTSG  180
AEEPSPADAK KSMSAAKLAE LALVDPKRAK RIWANRQSAA RSKERKMRYI AELERKLQAL  240
QTDATTLSAQ LTLLQRDTNG MTAENSELKL RLQTMEQQVH LQDALNDALK EEIQHLKVLT  300
GQGGILE
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00126DAPTransfer from AT1G06070Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091638.11e-176probable transcription factor PosF21
RefseqXP_011091639.11e-176probable transcription factor PosF21
SwissprotQ040881e-135POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A2G9GFX21e-170A0A2G9GFX2_9LAMI; Uncharacterized protein
STRINGXP_009605235.11e-165(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39652137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-120bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]