PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00180g00131.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bZIP

Protein Properties

Length: 421aa MW: 46022.9 Da PI: 6.6057

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00180g00131.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32	2.7e-10	230	288	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ l++e+ Peaxi162Scf00180g00131.1 230 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLTLLQRDTNGLTAEN 288 9*********************************************9998888777776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.2E-15	226	290	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.898	228	291	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.0E-10	230	284	No hit	No description
Pfam	PF00170	6.8E-9	230	284	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.05E-10	230	281	No hit	No description
CDD	cd14703	2.92E-25	231	280	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence Send to blast
MDKDKSSSHV VGSLPPSGRY SLCSPPGSSS SSNAKSEQSG LASLPPLGPG NASESGHFGH 60 GLLADSSQFS HDISRMPDNP PKKFGHRRAH SEILTLPDDI SFDSDLGVVG GLDGPSLSDE 120 TEEDFLSMYL DMDKFNNSSV SSEFQVGESS FSAAGASGSS QTPAMASADL GTDNVAPTVS 180 ARPRVRHQHS QSMDGSSTIK PEMLEEPSPS ENKKATSAAK LAELALIDPK RAKRIWANRQ 240 SAARSKERKM RYIAELERKV QTLQTEATTL SAQLTLLQRD TNGLTAENSE LKLRLQTVEQ 300 QVHLQDALND ALKEEIQHLK VVTGQGIANG GPMMNFPTSF GGNQQFYSNN HAMHTLLAAQ 360 QLQQLQIHSH KQQHQFQQHQ LYQFQQQQLQ HQHQQLPLQQ QEQLQQAGDM KLRTSLSSAQ 420 N

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence Send to blast

MDKDKSSSHV VGSLPPSGRY SLCSPPGSSS SSNAKSEQSG LASLPPLGPG NASESGHFGH  60
GLLADSSQFS HDISRMPDNP PKKFGHRRAH SEILTLPDDI SFDSDLGVVG GLDGPSLSDE  120
TEEDFLSMYL DMDKFNNSSV SSEFQVGESS FSAAGASGSS QTPAMASADL GTDNVAPTVS  180
ARPRVRHQHS QSMDGSSTIK PEMLEEPSPS ENKKATSAAK LAELALIDPK RAKRIWANRQ  240
SAARSKERKM RYIAELERKV QTLQTEATTL SAQLTLLQRD TNGLTAENSE LKLRLQTVEQ  300
QVHLQDALND ALKEEIQHLK VVTGQGIANG GPMMNFPTSF GGNQQFYSNN HAMHTLLAAQ  360
QLQQLQIHSH KQQHQFQQHQ LYQFQQQQLQ HQHQQLPLQQ QEQLQQAGDM KLRTSLSSAQ  420
N

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor with an activatory role.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00126	DAP	Transfer from AT1G06070	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016434211.1	0.0	PREDICTED: probable transcription factor PosF21
Swissprot	Q04088	1e-143	POF21_ARATH; Probable transcription factor PosF21
TrEMBL	A0A1S3X310	0.0	A0A1S3X310_TOBAC; probable transcription factor PosF21
STRING	XP_009799286.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3965	21	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-111	bZIP family protein

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Xu C, et al. Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration. Nat Plants, 2018. 4(2): p. 108-115 [PMID:29358751]