PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00170g00063.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

G2-like

Protein Properties

Length: 281aa MW: 31574.4 Da PI: 9.2579

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00170g00063.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.6	4.4e-31	176	229	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rF++ave LGG+e+AtPk++lelm+ k+Ltl+hvkSHLQ+YR+ Peaxi162Scf00170g00063.1 176 PRMRWTSTLHARFLHAVELLGGHERATPKSVLELMDAKDLTLAHVKSHLQMYRT 229 9****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	6.27E-15	173	229	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	2.8E-27	174	229	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.1E-23	176	229	IPR006447	Myb domain, plants
Pfam	PF00249	4.7E-7	177	228	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence Send to blast
MELFPAQPDL SLKISPPNIK PSSAWKRTTT SSCEDRNIDI EFWRRAVDNN IHSSSNCFEL 60 SLSNIPTRPN SCEPDSAHHS DHRQKYILQQ SNFQIHNQNQ GLSPEFGFLR GIPVYHQNSL 120 SQQQLDSTTT SATFPRTSLL ACSNINNNNK SIINSSGLLR SRFMSRFPSK RSMRAPRMRW 180 TSTLHARFLH AVELLGGHER ATPKSVLELM DAKDLTLAHV KSHLQMYRTV KTTDRAAAVA 240 SSGLSEVLDN GSSGDTSEDL MLETQYLRNS EFAVQGIGNM R

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-16	177	231	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-16	177	231	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-16	177	231	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-16	177	231	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-16	177	231	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-16	177	231	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-16	177	231	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-16	177	231	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016573194.1	4e-98	PREDICTED: probable transcription factor KAN2
TrEMBL	A0A2G3DCS1	1e-99	A0A2G3DCS1_CAPCH; Putative transcription factor RL9
STRING	XP_009615772.1	2e-95	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2738	22	55

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	3e-53	G2-like family protein