PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00166g00107.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 406aa    MW: 45337.8 Da    PI: 4.3956
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00166g00107.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.6e-194998255
                       AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Peaxi162Scf00166g00107.1 49 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 98
                              789******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.63E-3248105No hitNo description
PfamPF008471.0E-134998IPR001471AP2/ERF domain
SuperFamilySSF541712.55E-1949107IPR016177DNA-binding domain
SMARTSM003801.2E-3649112IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-2749105IPR001471AP2/ERF domain
PROSITE profilePS5103219.55949106IPR001471AP2/ERF domain
PRINTSPR003675.9E-85061IPR001471AP2/ERF domain
PRINTSPR003675.9E-87288IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MARKRSRASE GVGGKTSDDQ GGNAAAWDEM VKEAAAAAAL GGARRARKRF VGVRQRPSGR  60
WVAEIKDTIQ KIRVWLGTFD TAEEAARAYD EAACLLRGAN TRTNFWPSSS SSSLTPALPS  120
KITNLLLSRL KARNNALAAA AASSSSDSSN SPVESHDQGK QEEEYREELA CFSDSQYMEY  180
LKDPEDQIFD NSMMTNMSNF METCINDESF LFPPVESSDG TDKLKILNPP AVESDHENSS  240
EEINNNIMDG DEVTDIESNI DFQFVDEIGS SCYYSETFME HDMVYGDDET MILNEEMRRM  300
NYERKFSASL YAFNGITECL KLKLKSGGVM QRERTEQLSR LRNACKRSRN EDEQDKKIHS  360
SSSENGSANS QSSSPETEQS LTETTYDSEL SLWNSIDLPE ICTYVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
117ARKRSRA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016562270.11e-157PREDICTED: ethylene-responsive transcription factor 1-like
TrEMBLA0A1U8FTV91e-156A0A1U8FTV9_CAPAN; Ethylene-responsive transcription factor 7
TrEMBLA0A2G3ACE11e-156A0A2G3ACE1_CAPAN; ethylene-responsive transcription factor 1-like
STRINGXP_009768616.11e-152(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43102037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-21related to AP2 11