PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00164g01138.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family GRAS
Protein Properties Length: 923aa    MW: 104104 Da    PI: 6.7837
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00164g01138.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS242.51.7e-74974554367
                      GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalkl.fs 85 
                               lL + Ae++ +++  la+++L    + as +gdp+qR++ yf+eAL++r+a+  +++++   +++++ ++    + l++ k+   
  Peaxi162Scf00164g01138.1  97 LLQASAEMFVQKQYDLARKFLILCDHSASHSGDPLQRIVYYFAEALQSRIAK-ETGVSQEGGSRKNAVHEekPLRLLKSAKIaCR 180
                               5677899********************************************9.77777766554444333235566666666799 PP

                      GRAS  86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfA 169
                               + +P+  + ++   qaIl+ + +++rvHiiD++ + Gl  p +++aLa+R+e p   l++T+vg     s++++e++g+rL +fA
  Peaxi162Scf00164g01138.1 181 QETPFSHIIQFPGVQAILDNIVSARRVHIIDLGREFGLPVPIIMHALANRNECPLeLLKVTAVGT----SRKRIEQIGKRLLSFA 261
                               ***************************************************7665499*******....9*************** PP

                      GRAS 170 eelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFl 254
                               e++++pf fn+ v ++++dl+ e++++++gE++aV +  ++ +ll+++ +le     ++ ++ksl+P v+vv+e ea+++++ F 
  Peaxi162Scf00164g01138.1 262 ETMNIPFLFNI-VDSEIKDLKKENFELDEGEVVAVYSESRMCTLLAQPNHLEG----LIIVIKSLKPSVMVVSEIEASTDTPIFI 341
                               **********9.799******************************99999999....**************************** PP

                      GRAS 255 erflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakl 339
                               +rf   l++y a+fd+l + + +++++r+  E  ++++ i+nv+  eg+er +rh +   Wr+ + + G  ++++s++   qa+l
  Peaxi162Scf00164g01138.1 342 DRFNALLSFYGAFFDCLGTCMKPDDQNRSIAEGIYFREVIRNVIIGEGKERLHRHSKITFWRDFFARYGIVEAEFSDSSLYQASL 426
                               ************************************************************************************* PP

                      GRAS 340 llrkvk.sdgyrveeesgslvlgWkdrpL 367
                               l+++ + ++  +++ + ++l+l Wk+ p+
  Peaxi162Scf00164g01138.1 427 LIKRSAcWNSCSLDFDGKCLILKWKGTPM 455
                               ******9999***************9885 PP
2GRAS2422.5e-745569194374
                      GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl....f 84 
                               lL + A+++ +++  +a+ +L+   + as  g+p+qR++ yf+eAL++r+    +++ +  +++++ +  +++ l+ l+      
  Peaxi162Scf00164g01138.1 556 LLQASAKMFVQKQYDRARMFLSFCDQSASDIGNPLQRVVYYFAEALRKRIDM-ETGVISEGESRKAVD--VEKPLMLLRSailaC 637
                               56678999******************************************97.666666666655553..333333333333458 PP

                      GRAS  85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakf 168
                                +  P+  +  ++  q++l+ + ++++vHiiDf+ +  l  p +++aLa+R++ p   l+iT+vg     s++++ee g+r+++f
  Peaxi162Scf00164g01138.1 638 RQEIPFSHIIEFAGIQTVLDNTVSARKVHIIDFGRETALPMPIIMHALANRNDCPLeLLKITAVGT----SRQRIEENGKRISSF 718
                               8999************************************************655449********....9************** PP

                      GRAS 169 AeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesF 253
                               Ae++++pf fn+ v ++++dl+ e++++++gE++aV + ++l ++ + + +le     +++++ksl+P v+vv+e ea++n++ F
  Peaxi162Scf00164g01138.1 719 AETMDIPFLFNI-VDSEMKDLKKENFELDEGEVVAVYSEFRLCTMSAWPDHLEG----FVRVIKSLKPSVMVVSETEASTNTPIF 798
                               ***********9.799*****************************977777777....*************************** PP

                      GRAS 254 lerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqak 338
                                +rf   l+ +sa fd++ + + ++++ r+ +E   + ++i+nv+  eg+er++rh + + Wr+ + + G  + +ls++   qa+
  Peaxi162Scf00164g01138.1 799 IDRFNALLSLVSAYFDCYGTCMKPDDQSRAILEGY-FYEAIKNVIISEGEERFHRHSKISFWRNLFARYGIVETELSTSSLYQAS 882
                               ********************************998.************************************************* PP

                      GRAS 339 lllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                               ll+++++ +   +++ + ++l+l Wk+ p+ s+SaW+
  Peaxi162Scf00164g01138.1 883 LLIQRHAhWSSCSLDFDGKCLILKWKGTPVRSLSAWK 919
                               *******8888*************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098536.18368441IPR005202Transcription factor GRAS
PfamPF035146.0E-7297455IPR005202Transcription factor GRAS
PROSITE profilePS5098533.614527898IPR005202Transcription factor GRAS
PfamPF035148.6E-72556919IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 923 aa     Download sequence    Send to blast
MDSFHHPTLA LLELLSRLNS NMRRLTGDRQ HESLSATPWS SSSSALPSPD ELMNIARARL  60
SQITSISSLF YSFILDPSIA CSGLPPEVAA DVELSLLLQA SAEMFVQKQY DLARKFLILC  120
DHSASHSGDP LQRIVYYFAE ALQSRIAKET GVSQEGGSRK NAVHEEKPLR LLKSAKIACR  180
QETPFSHIIQ FPGVQAILDN IVSARRVHII DLGREFGLPV PIIMHALANR NECPLELLKV  240
TAVGTSRKRI EQIGKRLLSF AETMNIPFLF NIVDSEIKDL KKENFELDEG EVVAVYSESR  300
MCTLLAQPNH LEGLIIVIKS LKPSVMVVSE IEASTDTPIF IDRFNALLSF YGAFFDCLGT  360
CMKPDDQNRS IAEGIYFREV IRNVIIGEGK ERLHRHSKIT FWRDFFARYG IVEAEFSDSS  420
LYQASLLIKR SACWNSCSLD FDGKCLILKW KGTPMRREKM DSLPHPSLAS LELLKRFNSN  480
TRRLTGEKQN GKLSATPWSS SSSKLPSTDE LMNIARARLS QITSISSFVY SLILDPSISC  540
SGLPPEIAED VELSLLLQAS AKMFVQKQYD RARMFLSFCD QSASDIGNPL QRVVYYFAEA  600
LRKRIDMETG VISEGESRKA VDVEKPLMLL RSAILACRQE IPFSHIIEFA GIQTVLDNTV  660
SARKVHIIDF GRETALPMPI IMHALANRND CPLELLKITA VGTSRQRIEE NGKRISSFAE  720
TMDIPFLFNI VDSEMKDLKK ENFELDEGEV VAVYSEFRLC TMSAWPDHLE GFVRVIKSLK  780
PSVMVVSETE ASTNTPIFID RFNALLSLVS AYFDCYGTCM KPDDQSRAIL EGYFYEAIKN  840
VIISEGEERF HRHSKISFWR NLFARYGIVE TELSTSSLYQ ASLLIQRHAH WSSCSLDFDG  900
KCLILKWKGT PVRSLSAWKF LDD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A9e-3112391932375GRAS family transcription factor containing protein, expressed
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019174204.11e-142PREDICTED: scarecrow-like protein 23
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2511922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.12e-44RGA-like 2