PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00160g00836.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 327aa    MW: 37285.5 Da    PI: 4.7082
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00160g00836.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.97.3e-08164201646
                               HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHH CS
                       HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLek 46 
                                ++ErrRR+r+N++++ Lr+++Pk    +++ l+ + iL++
  Peaxi162Scf00160g00836.1 164 LMAERRRRKRLNDRLSMLRSVVPKI---SKELLERINILQQ 201
                               589*********************7...4666999999985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.036158209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-7159201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-5164201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.1E-7165201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MEYYDENGFL LDELLLALRS DSWDTSHVPI EMTDFHYNIN GLNNEYLEEN HVTIPLPCTT  60
TTTTTTSSFE EYIELPFDQN LNYSSNNWQL DTSLFTSSPI LENEVIGNSC SFQNLEVGNI  120
ACKLERAQYI EAQNVTDPTF NIGICPEEIK VKTKKQNGQP SKNLMAERRR RKRLNDRLSM  180
LRSVVPKISK ELLERINILQ QEMKMAPNQL NLMSIFKNEK PIEMFVRNSP KVEINCAGKS  240
SLLLSTLTTL DASGQDIQQC VISCFNDFAM QASCFEFSLH PRPIDTISHL VIMICNYLLV  300
SNISIFSIIS ATIYGERSNV IHPTTLD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166173ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009623441.12e-87PREDICTED: transcription factor bHLH93-like
RefseqXP_016490472.12e-87PREDICTED: transcription factor bHLH93-like
TrEMBLA0A1S4BNM45e-86A0A1S4BNM4_TOBAC; transcription factor bHLH93-like
STRINGXP_009623441.18e-87(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7892497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.13e-28beta HLH protein 93