PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00158g00123.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Dof

Protein Properties

Length: 299aa MW: 32391.8 Da PI: 10.0518

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00158g00123.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.7	5.1e-38	36	92	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +kcprCds+ntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rk k++ Peaxi162Scf00158g00123.1 36 PQKCPRCDSNNTKFCYYNNYSLTQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRT 92 689**************************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	28.863	37	91	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.7E-32	37	91	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-24	38	91	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	39	75	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence Send to blast
MEQAGRSGES DRNQQRRMKM PENIAAVVTT PPQPPPQKCP RCDSNNTKFC YYNNYSLTQP 60 RYFCKTCRRY WTQGGTLRNV PVGGGCRKGK RTIKGGPSSS SSAGESSSRS SQSHPPPPPL 120 NMGTNLSAPF FLGNNSRSQT LPLMSTFYPS GGFLSSLAAM QSMTQSQGVN QSLGVSSNQF 180 GGTSNMTLLQ GLQNLPTPPK ADHQNQQIEP QSGLYQVINR EKSMESSFYP SDQTLFQPTR 240 PLGSWTQRFI NTSSNNNNNN DVWNSSASAS GATTNTVTTA GSSLAPNQWP DLPGFGPSP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009623142.1	1e-104	PREDICTED: dof zinc finger protein DOF3.1-like
TrEMBL	A0A1S3YDD1	1e-102	A0A1S3YDD1_TOBAC; dof zinc finger protein DOF3.1-like
STRING	XP_009623142.1	1e-103	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	5e-33	TARGET OF MONOPTEROS 6