PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00158g00052.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | ERF | ||||||||
Protein Properties | Length: 172aa MW: 19681.7 Da PI: 10.5631 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.5 | 4.4e-20 | 57 | 107 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++k +g+WvAe+rd ++ ++r++lg+f+taeeAa a+++a +++g Peaxi162Scf00158g00052.1 57 KKYRGVRRRK-WGKWVAEVRDIRW---KTRIWLGTFDTAEEAALAYDKAVIEMRG 107 59*****998.**********544...6************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.54E-30 | 57 | 113 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 4.3E-28 | 58 | 113 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.8E-14 | 58 | 107 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.641 | 58 | 115 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.2E-32 | 58 | 121 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.41E-21 | 58 | 114 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 6.5E-12 | 59 | 70 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.5E-12 | 81 | 97 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence Send to blast |
MTYHQSKVGE SSEGKKPEKH EKTCGMEIII ENGKTKVIPR KVSKENKDIK LLGGNAKKYR 60 GVRRRKWGKW VAEVRDIRWK TRIWLGTFDT AEEAALAYDK AVIEMRGVDA VTNILKPPTR 120 DLPSREINFI NPSPRENSFI SPRPREINII GPGPREINFM ELPSSPTNDT RV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-18 | 52 | 114 | 8 | 71 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016500458.1 | 6e-47 | PREDICTED: ethylene-responsive transcription factor CRF2-like | ||||
TrEMBL | A0A1S4CH45 | 1e-45 | A0A1S4CH45_TOBAC; ethylene-responsive transcription factor CRF2-like | ||||
STRING | XP_009627598.1 | 4e-46 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 7e-25 | cytokinin response factor 4 |