PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00156g10012.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 481aa    MW: 53802.9 Da    PI: 7.5788
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00156g10012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY993e-3176133260
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                               dDgy+WrKYGqK+vkgs+fprsYY+Ct+++Cpv+kkve++  +++v+ei+Y+g Hnh+k
  Peaxi162Scf00156g10012.1  76 DDGYTWRKYGQKHVKGSKFPRSYYKCTQQNCPVRKKVECAP-NGQVIEIVYNGAHNHPK 133
                               8****************************************.***************85 PP
2WRKY105.13.6e-33264321259
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               +Dgy+WrKYGqK+vkg+++prsYY+CtsagC v+k+ver+++d k v++tYeg+Hnhe
  Peaxi162Scf00156g10012.1 264 EDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCIVRKHVERASDDLKSVITTYEGKHNHE 321
                               8********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-2762133IPR003657WRKY domain
SuperFamilySSF1182901.22E-2473133IPR003657WRKY domain
SMARTSM007744.2E-3475133IPR003657WRKY domain
PROSITE profilePS5081122.05676134IPR003657WRKY domain
PfamPF031064.9E-2576132IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-35248323IPR003657WRKY domain
SuperFamilySSF1182902.22E-28256323IPR003657WRKY domain
PROSITE profilePS5081137.78258323IPR003657WRKY domain
SMARTSM007745.2E-37263322IPR003657WRKY domain
PfamPF031063.5E-25264321IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    Send to blast
MSSPPCRPAF LTIPPGISPA ALLDSPKSMT HTETNNVPQT LNSNKQIPQP EEFTNKVNQF  60
EQRSAFSSSI SPSNSDDGYT WRKYGQKHVK GSKFPRSYYK CTQQNCPVRK KVECAPNGQV  120
IEIVYNGAHN HPKTQPIRRQ TMDESYVLGK VEETGQFEYN KDVTSCSSVL TEVSDPFSTN  180
PKSMNVFESA GTPELSSTLT SHDAEDENWT TQEGTFLDDA VNEYELEPKR RKKESYSAEP  240
SSLSRTMREP KLVVQVESEI DILEDGYRWR KYGQKVVKGN PNPRSYYKCT SAGCIVRKHV  300
ERASDDLKSV ITTYEGKHNH EVPSANKTNG AAGHVRSTPT LNGQPCITSQ KSLKDTNFRV  360
QVQDLPLPFE RKQFVGSEYL RPSFVGSYLG YDLGFPPLHS SSLGYSSLQL PDFPLPLPPL  420
PSRMSLSAGP NEPPLGDFHF NNHTLLPNGA SQSFFAVGNQ QHINNNNNSR LITAKEEIQW  480
T
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-3476324878Probable WRKY transcription factor 4
2lex_A7e-3476324878Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227233PKRRKKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009615387.10.0PREDICTED: probable WRKY transcription factor 4 isoform X1
RefseqXP_009615388.10.0PREDICTED: probable WRKY transcription factor 4 isoform X1
RefseqXP_009615389.10.0PREDICTED: probable WRKY transcription factor 4 isoform X1
TrEMBLA0A1U7XXG70.0A0A1U7XXG7_NICSY; probable WRKY transcription factor 26 isoform X1
STRINGXP_009615387.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57672237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26440.12e-74WRKY DNA-binding protein 34