PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00154g01021.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family HSF
Protein Properties Length: 405aa    MW: 46041.8 Da    PI: 5.3214
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00154g01021.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind23.81.2e-071446234
                              HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HH CS
              HSF_DNA-bind  2 Flkklyeiledeelkeliswsengnsfvvldee 34
                              Fl k+ye+++d+ ++ ++sws+ng+sfvv+++ 
  Peaxi162Scf00154g01021.1 14 FLVKTYELVDDPYTNPIVSWSQNGRSFVVWNPP 46
                              9*****************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.102.4E-9547IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467853.94E-151075IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004159.2E-221075IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004478.1E-51446IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.106.2E-44875IPR011991Winged helix-turn-helix DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MENSNGGSSA PAPFLVKTYE LVDDPYTNPI VSWSQNGRSF VVWNPPEKVD PEQWEFANEE  60
FIRGQRHLLK NIYRRKPIHS HSATTGQSAA PLTDSERQEY EEEIERLKRE NSLLQSSAEK  120
QEKFNQQYEF EVKSMMEQRL HNIVQRQGKL ISLLAQLLQR PDFSSDLIQY SNNNNKKRRL  180
LVSNYLEQEH ATNSIVAPKL DLEIVKKLDS SINFWERFLH GLQKTRNEEI YSFDVHTQPS  240
PSPVVIREMD TSSDDSGKRN SPTNHSSSPS RDIESSLELG GTLSPAISSI YINLECQLKP  300
SDQNSANSNI ASTFGVDDLI KDQVEANNDT SKSVSSLGND GFWQQFFTET PGSTEPHGVN  360
MLSKDVNSLT CDSRLAENQR HWWNREFNVD NLTKHLGHLS PATGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009769104.10.0PREDICTED: heat stress transcription factor A-4b-like
RefseqXP_016493667.10.0PREDICTED: heat stress transcription factor A-4b-like
TrEMBLA0A1S4BXN70.0A0A1S4BXN7_TOBAC; heat stress transcription factor A-4b-like
TrEMBLA0A1U7W3A40.0A0A1U7W3A4_NICSY; heat stress transcription factor A-4b-like
STRINGXP_009769104.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA84352329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45710.11e-44HSF family protein