PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00154g00124.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 429aa    MW: 47106.5 Da    PI: 9.715
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00154g00124.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.88.9e-06197220123
                               EEETTTTEEESSHHHHHHHHHH.T CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                               ++Cp Cg+ F  +++L+ H+++ H
  Peaxi162Scf00154g00124.1 197 FSCPECGEIFMKPDHLELHLSVrH 220
                               89******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.118197225IPR007087Zinc finger, C2H2
PROSITE patternPS000280199220IPR007087Zinc finger, C2H2
SuperFamilySSF563991.73E-22222428No hitNo description
Gene3DG3DSA:3.90.228.104.1E-14224427IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MAKSRRSSST KHSKESSTSR NGRQQLQREE KPHSWAVVRS LFTCKHLQAA RLEQQMLDGN  60
DKADNNNNNS NNNNNNNNDD KKCKKMKYSC SGSNICSNTK VMQRPESSPS PPKTSSKSTK  120
VTLNELNANG GNKAVISTSS LSSSSSSFSL QSATHSSSNS SAASRGIMPF RKLSGCYECR  180
MVIDPALRDP SLRSTIFSCP ECGEIFMKPD HLELHLSVRH AVSELGPEDT SRNIVEIIFQ  240
SSWLNKKIPV CKIERILKVR NTARTISRFE EYRDAIKAKA TTLPKKQPRC IADGNELLRF  300
YCTTFMCSLG LNGSSNLCTV PDCNVCTIIK NGFKVATTDG AACTKKGILT TATSGKAHDN  360
TGVVSHDHEK RAMLVCRVIA GRVKKSMEGT LEGYDSIAGA AGVYSNLDEL YVFNPKAILP  420
CFVVIYKGF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009587911.10.0PREDICTED: uncharacterized protein LOC104085555
TrEMBLA0A1S4CHY00.0A0A1S4CHY0_TOBAC; uncharacterized protein LOC107819234 isoform X1
STRINGXP_009587911.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA107231517
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.12e-95C2H2-like zinc finger protein