PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00152g00131.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 310aa    MW: 33910.1 Da    PI: 7.1098
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00152g00131.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.91.7e-1395142455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +h   Er RR+++++ f++L  llP++     +K +K++i+ +Av+YIk Lq
  Peaxi162Scf00152g00131.1  95 MHIWTERERRKKMRNMFSNLHALLPQL----PPKADKSTIVDEAVNYIKTLQ 142
                               56678*********************6....39******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.15791141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.14E-1693159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.78E-1594146No hitNo description
Gene3DG3DSA:4.10.280.104.9E-1594153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-1096142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-999147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2603.0E-6233293No hitNo description
SuperFamilySSF550214.58E-6235286No hitNo description
PROSITE profilePS516718.596237310IPR002912ACT domain
CDDcd048731.08E-5238276No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MDEGGGDCFI WENQGWSFMN SDNLGGNGEK LADKLPDISN GQQVAAPNAA KGVEVAGPST  60
GRKRSAPGKN GVKENGEANE GKVNGGVGGE SDHEMHIWTE RERRKKMRNM FSNLHALLPQ  120
LPPKADKSTI VDEAVNYIKT LQNTLQKLQR QKLERLHGMA ITMNPSIITS QKLGAHDHSK  180
ISREAYLADQ GSTNNNAISP TNNNAANNSL LIPHFPAVFQ TWTSPNVILN VSGEEAHISV  240
CCPKKPGLLS TICYVLEKHK IEVVSAQISS NQHRSMYMIQ AHASGSPDQF SETFPVEEIY  300
KQAAGEIMLW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2375862e-34AC237586.1 Populus trichocarpa clone POP031-J10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019251521.11e-179PREDICTED: transcription factor bHLH95-like
TrEMBLA0A1J6INZ61e-178A0A1J6INZ6_NICAT; Transcription factor bhlh95
STRINGXP_009800782.11e-175(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13242369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.13e-45bHLH family protein