PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00141g00622.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB
Protein Properties Length: 289aa    MW: 32845.4 Da    PI: 8.8413
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00141g00622.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.15.3e-103378346
                              SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
           Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                              +WT+eE +++ da +++ ++    W  +a++++ g+t ++++  ++ 
  Peaxi162Scf00141g00622.1 33 KWTPEENKRFEDALALFDKDtpdKWYNVAAMIP-GKTVNDVIKQYRE 78
                              8********************************.********99986 PP
2Myb_DNA-binding46.21e-14139183347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                               +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
  Peaxi162Scf00141g00622.1 139 PWTEEEHRQFLLGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 183
                               8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512939.0832984IPR017884SANT domain
SMARTSM007171.2E-93082IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.0E-43179IPR009057Homeodomain-like
SuperFamilySSF466896.58E-123286IPR009057Homeodomain-like
CDDcd001671.98E-73380No hitNo description
PfamPF002492.5E-83379IPR001005SANT/Myb domain
PROSITE profilePS5129421.106132188IPR017930Myb domain
SuperFamilySSF466892.3E-17134187IPR009057Homeodomain-like
TIGRFAMsTIGR015578.3E-18135187IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.2E-12136183IPR009057Homeodomain-like
SMARTSM007173.5E-13136186IPR001005SANT/Myb domain
CDDcd001675.65E-11139184No hitNo description
PfamPF002493.7E-12139183IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MNRDMGFLSP ATYIKNSSWL FEENNNNKGS STKWTPEENK RFEDALALFD KDTPDKWYNV  60
AAMIPGKTVN DVIKQYRELV EDISDIEAGL TPIPGYTTSN SFTLEWVDNQ EGFHGFKQFY  120
GGKKNSSNRS DHERKKGVPW TEEEHRQFLL GLKKYGKGDW RNISRNFVTT RTPTQVASHA  180
QKYFIRQLSG GKDKRRSSIH DITVVNLTES KSSSPENHHS SPDKSTPFPQ HSKMNGMVKT  240
LCEYNSPNQD SDITFNSSSG GLMNTTPFRG ASYGLEHGMH NITLQGLQF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A6e-192899576RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006363051.10.0PREDICTED: transcription factor DIVARICATA-like
SwissprotQ8S9H74e-99DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A0V0I9A00.0A0A0V0I9A0_SOLCH; Putative transcription factor DIVARICATA-like
STRINGSolyc09g014250.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45824140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-105MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]