PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00128g10022.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | ERF | ||||||||
Protein Properties | Length: 372aa MW: 41115.6 Da PI: 7.88 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54 | 4.1e-17 | 45 | 94 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g Peaxi162Scf00128g10022.1 45 RYRGVRRRP-WGRYAAEIRDPL----SkERRWLGTFDTAEEAACAYDCAARAMRG 94 69*******.**********73....35999**********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.69E-30 | 45 | 101 | No hit | No description |
Pfam | PF00847 | 2.6E-10 | 45 | 94 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.891 | 45 | 102 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.7E-29 | 45 | 101 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.9E-21 | 45 | 102 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.2E-33 | 45 | 108 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.1E-9 | 46 | 57 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.1E-9 | 68 | 84 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009733 | Biological Process | response to auxin | ||||
GO:0009880 | Biological Process | embryonic pattern specification | ||||
GO:0048825 | Biological Process | cotyledon development | ||||
GO:0051726 | Biological Process | regulation of cell cycle | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence Send to blast |
MEDAMRRLNQ ESDVIPIQTT SKRCATTTTN KRSLKDTGAT GGTVRYRGVR RRPWGRYAAE 60 IRDPLSKERR WLGTFDTAEE AACAYDCAAR AMRGVKARTN FVYPPTHQTT STNENFLNIP 120 SSFNYTSSHV KSSLPTRQLY HSSFLNPYGS TSTRGVNGSV QTCQKTNESF NTLLLREILN 180 TNSSNMANSP FSNSMSNVTS SPLYENLPKF SSTFLMNQTC SSNFLPSSSN AISSSSIMTL 240 PKFENLHSVN NPSTLDDHSG MDFFPSDPSD NSGLLEEALN GFFPKPKPMK SEPLSPLSTF 300 TNISTKAQGT GVSNISQNFD GLNSGFGFEF SPTYQQDFQE NVQVSTGENN MMGDIFQYPE 360 LLSIFAAKLQ NA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 6e-19 | 46 | 101 | 3 | 59 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
5wx9_A | 7e-19 | 35 | 101 | 6 | 71 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019264879.1 | 1e-138 | PREDICTED: ethylene-responsive transcription factor ABI4-like | ||||
TrEMBL | A0A314L359 | 1e-136 | A0A314L359_NICAT; Uncharacterized protein | ||||
STRING | XP_009598275.1 | 1e-133 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24590.1 | 2e-14 | DORNROSCHEN-like |