PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00126g01127.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family CAMTA
Protein Properties Length: 890aa    MW: 100696 Da    PI: 9.1096
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00126g01127.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1169.64.9e-53171342118
                      CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyY 85 
                               l+e ++rwl++ ei++iL n++k+ lt e++ rp+ gs++L+++k+  yfrkDG+sw+kkkdgktv+E+hekLK g v+vl+cyY
  Peaxi162Scf00126g01127.1  17 LQEaQHRWLRPVEICEILRNHQKFYLTPEPPVRPPGGSMFLFDQKVQSYFRKDGHSWRKKKDGKTVQEAHEKLKAGRVDVLHCYY 101
                               56669******************************************************************************** PP

                      CG-1  86 ahseenptfqrrcywlLeeelekivlvhylevk 118
                               ah+e+n++fqrr+yw+L e+l++ivlvhy+evk
  Peaxi162Scf00126g01127.1 102 AHGEDNKNFQRRSYWMLAEQLKHIVLVHYREVK 134
                               ******************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143777.22613139IPR005559CG-1 DNA-binding domain
SMARTSM010769.6E-7316134IPR005559CG-1 DNA-binding domain
PfamPF038592.7E-4719132IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.103.5E-8347436IPR013783Immunoglobulin-like fold
PfamPF018332.4E-7348434IPR002909IPT domain
CDDcd001020.00756348434No hitNo description
SuperFamilySSF812963.06E-17349434IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.202.8E-14527642IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484037.15E-15530640IPR020683Ankyrin repeat-containing domain
CDDcd002047.19E-12541639No hitNo description
PROSITE profilePS5029715.353547639IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.472580612IPR002110Ankyrin repeat
SMARTSM002480.016580612IPR002110Ankyrin repeat
SMARTSM002482800619648IPR002110Ankyrin repeat
SMARTSM0001570700722IPR000048IQ motif, EF-hand binding site
SMARTSM000151.6754776IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.041755784IPR000048IQ motif, EF-hand binding site
SMARTSM00015160777799IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 890 aa     Download sequence    Send to blast
FFNFCCYAFL VDLEQLLQEA QHRWLRPVEI CEILRNHQKF YLTPEPPVRP PGGSMFLFDQ  60
KVQSYFRKDG HSWRKKKDGK TVQEAHEKLK AGRVDVLHCY YAHGEDNKNF QRRSYWMLAE  120
QLKHIVLVHY REVKEGYRVG ASSLQFIHQA PQLENTQSSS TLCLESGIIV QESHTLSPST  180
VDSKQQALSS ELFCDDPKGD EADALLVSAS AHFLPINSPL STMKQTGLVE ISRGSFQLNP  240
QFSSFLSTDI HSSGRILNVN MADLLYSGRL NVADLLSNKL SYSRLDAAKA VKVVANRRNR  300
LAIASGELLE STRFYIYKVD IIQSTDRIHM QLDTDSLGPS LSREQLFSIS EFSPDWVYSG  360
LETKVLIIGT FLGHGKHPAW QKWSCMFGEV EVPAEVLSRN IIRCQVPSHA PGRVPFYVTC  420
SNRLACSEVR EFEYCEKPSE LALILRPSDE VRLQVRLAKL LYSGLNRKFS DCSRKECEKC  480
KLKNLLCSLK CGTGNDSERL EDLLAIIEGN LINFREMLIQ NFMKDKLYEW LLSRAHEEKV  540
PNLLDDEGQG VIHLVAVLGY EWGLLPLISA GLSPNFRDAR GRTALHWASH YGREDMVIAL  600
VKLGVAAGAV DDPTAAFPGG QTAADLAFSG GHKGIAGYLA VSDLTTHLQS LVINNNALDN  660
IAAELEAEKA FQSAAQEVVS FNETINNDIF LRVSLASVRK SAHAASLIQA AFRARSFRQR  720
QLTENRNDVS EALVDLVALG SLNKVQKVNH FEDYLHSAAI KIQHKYRGWK GRSEFLKIRN  780
RIVNNQAHVR GHQVKQYKKF VWSVSVVEKA ILRWRRKKPG LRGFRPQKTS PKGPAELEKN  840
DEYEFLSIGR EQKLVGVEKA LSRVQSMVRH PEARDQYIRL VVKFERSKGR
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in freezing tolerance in association with CAMTA1 and CAMTA3. Contributes together with CAMTA1 and CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:23581962). Involved together with CAMTA3 and CAMTA4 in the positive regulation of a general stress response (PubMed:25039701). Involved in tolerance to aluminum. Binds to the promoter of ALMT1 transporter and contributes to the positive regulation of aluminum-induced expression of ALMT1 (PubMed:25627216). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:23581962, ECO:0000269|PubMed:25039701, ECO:0000269|PubMed:25627216, ECO:0000305|PubMed:11925432}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salt, wounding, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by aluminum (PubMed:25627216). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:25627216}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016574931.10.0PREDICTED: calmodulin-binding transcription activator 3-like isoform X2
SwissprotQ6NPP41e-135CMTA2_ARATH; Calmodulin-binding transcription activator 2
TrEMBLA0A2G2ZAP40.0A0A2G2ZAP4_CAPAN; Uncharacterized protein
STRINGSolyc01g057270.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA137161011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-122Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]