PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00108g00911.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB
Protein Properties Length: 1609aa    MW: 175440 Da    PI: 6.9887
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00108g00911.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81.1e-07806847346
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                               +WT  E e++++  + +G++ +++Ia+ +  ++t  +c+++++k
  Peaxi162Scf00108g00911.1 806 PWTSVEREIFIEKLATFGKD-FRKIASFLD-HKTTADCIEFYYK 847
                               8*****************99.*********.***********98 PP

2Myb_DNA-binding30.11.2e-09928968345
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
           Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                                WT eE  ++++av  +G++ +  I+r++  +R++ qck ++ 
  Peaxi162Scf00108g00911.1 928 DWTDEEKSIFIQAVSAYGKD-FVMISRCVR-TRSRDQCKIFFS 968
                               5*****************99.*********.********8775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.79E-13789850IPR009057Homeodomain-like
PROSITE profilePS5129314.617802853IPR017884SANT domain
SMARTSM007171.8E-8803851IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-4806847IPR009057Homeodomain-like
PfamPF002491.5E-5806847IPR001005SANT/Myb domain
PROSITE profilePS5129311.574924975IPR017884SANT domain
SMARTSM007171.2E-8925973IPR001005SANT/Myb domain
SuperFamilySSF466891.17E-10926975IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-5928969IPR009057Homeodomain-like
PfamPF002495.8E-7928967IPR001005SANT/Myb domain
CDDcd001678.40E-7929967No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1609 aa     Download sequence    Send to blast
MPSEPLPWDR KDRKHDALAG GGTRWREAPP PPHHHRTTCF ADCRSSRAPP PTGHGKQGGW  60
HMYPEESGHG FMPSTRLNEK MIVEDDNCRQ SRGDGGKYGR SSSSSRENRS FGQRDWRGGS  120
HSSPSGPARQ NDVTNDQRSG DGMVTHNSEY INGWDQSHHS RDQHNKSGSV NGVAASTGQR  180
VDRENSLGSV EWRPLKWTRS GSLSSRGSLS HSGSSKSMGV DSSETKPELQ PGNSKPVQSL  240
NGDANACVTS AAPSEETTSR KKPRLGWGEG LAKYEKKKVG PEDCAVKAGA SISGDSVEAG  300
HSHPLNLADK SPRVAAFLDC PSPATPSSVA CSSSPGLEDK QLVKSTNNDQ DVGNLSASPS  360
VVSQYHSEGL AFNLESFDLA QISNLNSSIN ELLQSEDPSS VDSGFMRTTA VNKLLLWKSD  420
ITKALEKTEA EIDSLENELK TLISEPKNTQ VVPSASCSPP KECNSVSHED QGTTSNIASR  480
PPPLQVVIPD DVTGEEGANI QDNERTEMKV EDIDSPGSAT SKFVELPSEK NVAPVDAMKP  540
DLGMLIIDDN KSGSFDVKAC SFIEEKTKCR SSDGKACGVS EEKSRDTLAC GLGSQTTVSC  600
SLSVCDGSLS CGEDALYNLI LAANKDSAHR AFEVFENLLP AGECTFDFPR DVSVSSLPID  660
PAVKERFARR KQFQKFKEKI IALKFRVHQH LWKEDMLSVR KFRARSQKKF DLSPRPVQIG  720
HQKQRSTVRS RFSTAVGNLS PVPSSEILNF ASRLLSDIGA KVYRNTLRMP ALILDQKEKT  780
MSRFISKNSL VEDPCAVEKE RFLINPWTSV EREIFIEKLA TFGKDFRKIA SFLDHKTTAD  840
CIEFYYKNHK SDCFERTKKK PDYSKQAKVC SANTYLVASS GKRWNRNQEW KHQKVGSSTR  900
FPPTSEVAQS IDDETCSDES CGEMDPTDWT DEEKSIFIQA VSAYGKDFVM ISRCVRTRSR  960
DQCKIFFSKA RKCLGLDKIL PGPGNLERQD VNGGSDPDAC VIETELLCNE KSSLKLEEIN  1020
EFCVKGGISK PDMTSSDDKD GAGELDSVDT EPVSKNSVQV NCHVDKQEVE FNRECEIQTG  1080
ACTGNGRGHD NIVRVSPEGV QIDGHASENG LPDIVRANKV SAKHLGEEIN GVVSLPQHGL  1140
KDIKAEMAEV SRSNCSLEDM KPNMVPSGSI SHLAAARGEL CPLNGSQNMT VLESDSKYKS  1200
DVNYSVSNIS VQRKQIHQAS NADNSLDLGL ENVDNATQSP EQSLPSTSRL AHVESCQVRG  1260
SYSLGETAPK ESGDSGSSTS TALRDIKNVV RNLHSDTFST TSCFLQKCNG INRSGSVSDL  1320
PIPNREPMGG SSSKVEKPCR NGDVKLFGQI LSKPCAQQSA SSNSQQSNGN IQQLKVCSNS  1380
LGASHSLDGN PASTAKFERN NFLSSENHPV RSFGFWDGNR IQTGFSALPD SAILLAKYPA  1440
AFGNYALSSS KMEQSALHGV VKTTERNLNG VPVFPARDVS SNNGVAADYQ VYSNREVQPF  1500
TIEMKQRQEA VFSEMQRRNG FDVVSGMQQQ ARGVVVGRGG GILVGGQCTG VVSDPVAAIK  1560
MHYAKAEQFS GQASIIREDD SWRSKGDISR KRVRSGLFPL KMIIIAYFG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009803598.10.0PREDICTED: uncharacterized protein LOC104248943
RefseqXP_016486022.10.0PREDICTED: uncharacterized protein LOC107806392
TrEMBLA0A1S4BAX10.0A0A1S4BAX1_TOBAC; uncharacterized protein LOC107806392
TrEMBLA0A1U7YKF20.0A0A1U7YKF2_NICSY; uncharacterized protein LOC104248943
STRINGSolyc04g049120.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59042332
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52250.11e-116MYB family protein