PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00108g00420.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ARR-B
Protein Properties Length: 694aa    MW: 75677.4 Da    PI: 6.2125
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00108g00420.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like56.27.8e-18208251145
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 
                               kpr++W+ eLH++Fv av+qL G e+A+Pk+il+lm+v+ L++e+
  Peaxi162Scf00108g00420.1 208 KPRVVWSIELHRKFVAAVNQL-GLERAVPKRILDLMNVEKLSREN 251
                               79*******************.*******************9986 PP
2Response_reg807.7e-27261341109
                               EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTH CS
              Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgee 83 
                               vl vdD+p+ ++ll  +l+k +y +v+++++++ al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+g++
  Peaxi162Scf00108g00420.1  26 VLAVDDDPICLKLLDGLLKKCQY-QVTTTSQARTALKMLRENRdrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDS 108
                               799********************.***************999889*******************87754.558************ PP

                               HHHHHHHHTTESEEEESS--HHHHHH CS
              Response_reg  84 edalealkaGakdflsKpfdpeelvk 109
                                ++ + ++ Ga d+l Kp+  eel +
  Peaxi162Scf00108g00420.1 109 RLVMKGIDHGACDYLLKPVRLEELKN 134
                               ***********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0363924.1E-1461692IPR017053Response regulator B-type, plant
SuperFamilySSF521727.4E-3623150IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.8E-4323157No hitNo description
SMARTSM004489.5E-3324136IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.93225140IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.7E-2426134IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.05E-2348140No hitNo description
SuperFamilySSF466891.63E-10205259IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.0E-18205260IPR009057Homeodomain-like
TIGRFAMsTIGR015572.7E-14208251IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 694 aa     Download sequence    Send to blast
MTVEEIRGNM GGESDNFDNF PVGMRVLAVD DDPICLKLLD GLLKKCQYQV TTTSQARTAL  60
KMLRENRDRF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSANGDSRL VMKGIDHGAC  120
DYLLKPVRLE ELKNIWQHVI RKKKVHSKKQ NKSNEQDIAQ QGSGESGKGP QLLDNADQNG  180
KLNKKRKDEE YESDENGNDN EDPATQKKPR VVWSIELHRK FVAAVNQLGL ERAVPKRILD  240
LMNVEKLSRE NKYRLYLKRI SSEATQQANM VAARDSAYMR MGSLDGLGGF RTMAGSGRFG  300
QASLSSCASG GRFGRLNSPA GIGLRNLALS PQLQPNHGQN LSNSINALTK SSSNVLLAGQ  360
NASLFQGLPA SLELDQLQQS NCATNMGQLN PLDDSGLLTG ASTFPDSRSV VGISNGSLSG  420
ISNNPILLQG NSQQPLMGGG IGNQHSIASF SSESFNTGVS GSSNFLDRGG CNENWQNSVQ  480
PLNFQSSSLP LNEPFSNSHF PQDRVRDNNT SAGPQLQNNP VGFSSSTIVS LPFEASRGET  540
QCRDSFGGAV QIMNQAPCQR LQDQKHNYSR NSNYIFGSSS SQVSSNGGVA FLTNSMDQNN  600
DMFCRRVDMS LTGRSNGGSS ALMQHNESEN LTLNSRTRTN EDYLLETTKQ QVGFLPQDYG  660
SLDDLTSAMK REQDGAMLVG GEFGFDAYSF GSGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A5e-20206261364ARR10-B
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006350077.10.0PREDICTED: two-component response regulator ORR24-like
TrEMBLM1AD550.0M1AD55_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000202330.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22582458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-114response regulator 12