PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00102g00111.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family GATA
Protein Properties Length: 171aa    MW: 18266.8 Da    PI: 10.2191
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00102g00111.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.49.9e-193165135
                      GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                              C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++
  Peaxi162Scf00102g00111.1 31 CVDCGTSKTPLWRGGPAGPKSLCNACGIKSRKKRR 65
                              ********************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004012.0E-142575IPR000679Zinc finger, GATA-type
PROSITE profilePS5011412.3742561IPR000679Zinc finger, GATA-type
SuperFamilySSF577165.23E-122865No hitNo description
Gene3DG3DSA:3.30.50.103.6E-153065IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.29E-123065No hitNo description
PfamPF003201.5E-163165IPR000679Zinc finger, GATA-type
PROSITE patternPS0034403156IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MVELSDKDIG SEEMSSEITC VETSESNVKT CVDCGTSKTP LWRGGPAGPK SLCNACGIKS  60
RKKRRALLGL NKEDKKSKKS VAFGNKSIGL LNNQNQSCNS NSSSSGDSST SSNIGKNIIS  120
ASLKRKLLPF GSEVILQRPR SRSNSSQRRK LGEVEQAAFL LMALSCGSVY G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016572171.11e-81PREDICTED: GATA transcription factor 15-like
TrEMBLA0A2G3CIE32e-80A0A2G3CIE3_CAPCH; GATA transcription factor 23
STRINGPGSC0003DMT4000602416e-73(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19992362
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.16e-33GATA transcription factor 15