PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00091g00312.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bZIP

Protein Properties

Length: 473aa MW: 52769.9 Da PI: 6.0298

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00091g00312.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.3	8.8e-10	188	229	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAA++sR RKka++++Le+ L++ ++L Peaxi162Scf00091g00312.1 188 AKILRRLAQNREAAKKSRIRKKAYVQQLETSRIRLSQLEQDL 229 6788*************************8766666665555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.7E-6	185	262	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	2.1E-7	187	230	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.829	187	231	IPR004827	Basic-leucine zipper domain
CDD	cd14708	1.27E-21	189	241	No hit	No description
SuperFamily	SSF57959	2.25E-6	190	232	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.0E-7	191	233	No hit	No description
PROSITE pattern	PS00036	0	192	207	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	9.8E-32	270	344	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence Send to blast
MASQRIGENT GLTNSGPSHH HNMPYAVFRG LNPASTSFIN QEGSTFDFGE LEEAFVLQGF 60 KTSNDETKES LYAATAKPTL EMFPSWPIRF QQTTRDNSKS GEESTDSGTL SSRAQVHFEP 120 ESPISKKIYS DHQALEQQQQ QFQEMPSDNS PRTGGLQTEL GSNPNNEKVL FHDVRKNAAS 180 TSEKVPDAKI LRRLAQNREA AKKSRIRKKA YVQQLETSRI RLSQLEQDLQ RARSQGINLG 240 GGNVPGANIS SGASIFDMEY SRWLDDDHRH MSELRTALQA HLSDGDLRVI VDGYIAHYDE 300 IFSLKGMTAK SDVFHLITGM WTTPAERCFL WMGGFRPSEL IKMLIGQLDP LTEQQVVGIY 360 SLQQSSQQAE EALSQGLEQL QQSLIDTIAG GSINDGMHHM ALALGKLSNL EGFVRQTSST 420 CFLVIGEYYG RLRALSSLWI SRPRETLIAD DSSCQTTAEL QMVQSSHNYF TSF

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence Send to blast

MASQRIGENT GLTNSGPSHH HNMPYAVFRG LNPASTSFIN QEGSTFDFGE LEEAFVLQGF  60
KTSNDETKES LYAATAKPTL EMFPSWPIRF QQTTRDNSKS GEESTDSGTL SSRAQVHFEP  120
ESPISKKIYS DHQALEQQQQ QFQEMPSDNS PRTGGLQTEL GSNPNNEKVL FHDVRKNAAS  180
TSEKVPDAKI LRRLAQNREA AKKSRIRKKA YVQQLETSRI RLSQLEQDLQ RARSQGINLG  240
GGNVPGANIS SGASIFDMEY SRWLDDDHRH MSELRTALQA HLSDGDLRVI VDGYIAHYDE  300
IFSLKGMTAK SDVFHLITGM WTTPAERCFL WMGGFRPSEL IKMLIGQLDP LTEQQVVGIY  360
SLQQSSQQAE EALSQGLEQL QQSLIDTIAG GSINDGMHHM ALALGKLSNL EGFVRQTSST  420
CFLVIGEYYG RLRALSSLWI SRPRETLIAD DSSCQTTAEL QMVQSSHNYF TSF

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019229531.1	0.0	PREDICTED: transcription factor TGA2.2-like isoform X1
Swissprot	Q93XM6	0.0	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A314KL97	0.0	A0A314KL97_NICAT; Tgacg-sequence-specific dna-binding protein tga-2.1
STRING	XP_009623541.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3683	23	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-173	bZIP family protein

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]