PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00087g02224.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Dof
Protein Properties Length: 324aa    MW: 35610.6 Da    PI: 8.7236
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00087g02224.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1252.4e-3972133263
                    zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                               k++a++cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rkn++sss
  Peaxi162Scf00087g02224.1  72 KDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTAGGTLRNVPVGGGSRKNRRSSS 133
                               7899******************************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074786.0E-2965130IPR003851Zinc finger, Dof-type
PfamPF027014.3E-3373130IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.94776130IPR003851Zinc finger, Dof-type
PROSITE patternPS01361078114IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MTAPDKAGEI FVLEHIINCF SSHPFFFFQF MDTTQWTQDI GLVTSMAAEI ALPNVTCSRP  60
ASSLEKKVRP QKDQAVNCPR CNSTNTKFCY YNNYSLTQPR YFCKTCRRYW TAGGTLRNVP  120
VGGGSRKNRR SSSLSLSSSS SSSQKLPDLN PNSSHYSHQN PNKINLGISS QDLNLGFPSI  180
IHHDHNNYFH GVPQFLELPK MESSNNENKS DQLMGSYLMP TSTTSTSTSS STTPISALDL  240
LRTGMASRGL TSFISSPPPN LNAFSFSSGL QENGAKNIML PFGCSLKQFS GTSTTEAEHH  300
QSTKGQENSN AGYWNNGMFG GGSW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755221e-57HG975522.1 Solanum lycopersicum chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009616794.11e-128PREDICTED: dof zinc finger protein DOF2.5-like
RefseqXP_016470461.11e-128PREDICTED: dof zinc finger protein DOF2.5-like
TrEMBLA0A1S4A1L91e-126A0A1S4A1L9_TOBAC; dof zinc finger protein DOF2.5-like
STRINGXP_009616794.11e-127(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.48e-50Dof family protein