PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00085g00045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | Dof | ||||||||
Protein Properties | Length: 334aa MW: 36231.7 Da PI: 8.3943 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126.3 | 9.5e-40 | 27 | 87 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+al+cprCds ntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk + Peaxi162Scf00085g00045.1 27 QEQALNCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIK 87 57899*****************************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 8.0E-27 | 24 | 85 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.6E-33 | 29 | 85 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.422 | 31 | 85 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 33 | 69 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010052 | Biological Process | guard cell differentiation | ||||
GO:0010118 | Biological Process | stomatal movement | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:1902066 | Biological Process | regulation of cell wall pectin metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence Send to blast |
MTSQENKEES GQSSGGGRKT SSASRPQEQA LNCPRCDSPN TKFCYYNNYS LSQPRHFCKT 60 CRRYWTKGGA LRNVPIGGGC RKNKKIKTSS SSRLSVDSKD TSVSSDIGGL KFFHGLSPAM 120 DFQLGGLNFP RLSSTSSTSG SIFNQFSTFG DISTTSAPIG STSCFSLDPS GSCSGSLLGF 180 NSFPFSNSLL KQGDTMASSI ESLSSINQDL HWKLQQQRLA MLFGGENQKE SNLVSSVGLE 240 NQIQKPQPIL FQNLEISSKA EEEAAAFGNN INSRKDHGTG SHGNNNLSTE WFFDNSFNPT 300 STNSSSGNIA NDQNTTNWNS IQAWSNLNQY STLP |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975450 | 5e-51 | HG975450.1 Solanum pennellii chromosome ch11, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009774290.1 | 0.0 | PREDICTED: dof zinc finger protein DOF5.7 | ||||
Refseq | XP_016448543.1 | 0.0 | PREDICTED: dof zinc finger protein DOF5.7 | ||||
TrEMBL | A0A1S3Y991 | 0.0 | A0A1S3Y991_TOBAC; dof zinc finger protein DOF5.7 | ||||
TrEMBL | A0A1U7WJ67 | 0.0 | A0A1U7WJ67_NICSY; dof zinc finger protein DOF5.7 | ||||
STRING | XP_009774290.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5242 | 22 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65590.1 | 2e-61 | Dof family protein |