PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00083g01217.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family DBB
Protein Properties Length: 187aa    MW: 20951.8 Da    PI: 7.4057
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00083g01217.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.61.1e-07433534
                  zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                               C+ +e+  ++lfC  ++  lC+ C ++ H
  Peaxi162Scf00083g01217.1  4 LCDVCESAAAILFCAADEAALCQACDDKVH 33
                              7*************************9998 PP
2zf-B_box30.57.4e-105292238
                  zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                              + ++C+ +e++++ ++Ce +++ lC +C +  H g    H+
  Peaxi162Scf00083g01217.1 52 DVPRCDICENEPAFFYCEVDGSSLCLQCDMMVHVGgkrtHS 92
                              6799**************************99966566675 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.911147IPR000315B-box-type zinc finger
SMARTSM003365.4E-7147IPR000315B-box-type zinc finger
PfamPF006431.8E-6342IPR000315B-box-type zinc finger
CDDcd000214.35E-6345No hitNo description
SuperFamilySSF578457.78E-64888No hitNo description
SMARTSM003361.1E-105196IPR000315B-box-type zinc finger
PROSITE profilePS501199.5845196IPR000315B-box-type zinc finger
PfamPF006436.5E-85291IPR000315B-box-type zinc finger
CDDcd000212.48E-75493No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010100Biological Processnegative regulation of photomorphogenesis
GO:0070370Biological Processcellular heat acclimation
GO:0071483Biological Processcellular response to blue light
GO:0005634Cellular Componentnucleus
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MRTLCDVCES AAAILFCAAD EAALCQACDD KVHMCNKLAS RHVRVGLAKP NDVPRCDICE  60
NEPAFFYCEV DGSSLCLQCD MMVHVGGKRT HSRYLLLRQK VEFPGDKPGP TEELARNTLD  120
PGENKREYRH SPKPMAEEST QNHRVSPVPV SDRSADGHAK KDKLIDLNVK PNRYHGQASN  180
QYQVRQL
Functional Description ? help Back to Top
Source Description
UniProtActs as negative regulator of seedling photomorphogenesis. {ECO:0000269|PubMed:18540109}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016560543.11e-118PREDICTED: B-box zinc finger protein 19-like isoform X1
SwissprotC0SVM58e-69BBX19_ARATH; B-box zinc finger protein 19
TrEMBLA0A2G3AAA51e-117A0A2G3AAA5_CAPAN; B-box zinc finger protein 19
STRINGXP_009599859.11e-117(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31752340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.13e-71DBB family protein