PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00074g01728.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family AP2
Protein Properties Length: 1146aa    MW: 127145 Da    PI: 9.3989
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00074g01728.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.59.3e-10136176549
                       AP2   5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaa 49 
                               G+r+ k +gr+ A Irdp    +r k+++lg+f+t e+A ka i  
  Peaxi162Scf00074g01728.1 136 GIRRQK-NGRYGAVIRDP----IRhKQVWLGTFDTVEQASKAIISK 176
                               999888.8*********7....357**********99999998765 PP
2AP229.32.1e-09317355547
                       AP2   5 GVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaai 47 
                               G+r  + +gr++A I d       r k+++lg+f+t eeA ka+ 
  Peaxi162Scf00074g01728.1 317 GIRKQS-SGRYAAVITDrI-----RhKKVWLGTFDTIEEASKAYF 355
                               899776.8*********32.....35*****************96 PP
3AP235.72.1e-11410456251
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 
                               ++ GV+ +k++g++ +eI  p    ++ k+++lg+fgtaeeA +a+   ++
  Peaxi162Scf00074g01728.1 410 HIIGVHKRKTSGKYTSEITNP----ISeKKIWLGTFGTAEEASQAYQSKKL 456
                               789**************9997....358*****************976665 PP
4AP226.41.7e-08554597552
                       AP2   5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                               G+r  k +gr+ A I+dp    +r k+++lg+f+t e+A +a+   + +
  Peaxi162Scf00074g01728.1 554 GIRSQK-NGRYGAFIKDP----IRhKQVWLGTFDTVEQASEAYFSKKTE 597
                               888666.9*********7....357*****************9776655 PP
5AP235.72.2e-11649696151
                       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                               +++ GV   k++g++ +eI  p++   +k+++lg+fgtaeeA +a+   ++
  Peaxi162Scf00074g01728.1 649 THVVGVNKSKTTGKYTSEITNPVT---KKKIWLGTFGTAEEASQAYQSKKL 696
                               5799***************99654...5*****************976665 PP
6AP232.91.6e-10840885554
                       AP2   5 GVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                               G+r+ k +gr+ A Ird +     r k+++lg+f+t eeA +a i  + ++e
  Peaxi162Scf00074g01728.1 840 GIRRQK-NGRYGAVIRDpF-----RhKQVWLGTFDTVEEASEAIISKKAEFE 885
                               999887.8*********66.....56*****************998887766 PP
7AP232.22.6e-10936982251
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaark 51 
                               ++ GV   k++g++ +eI  p    ++ k+++lg+f taeeA +a+   ++
  Peaxi162Scf00074g01728.1 936 RIVGVNKSKTTGKYTSEITNP----INkKKIWLGTFATAEEASQAYQSKKL 982
                               789**************9996....234*****************976665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.51133195IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-8134175IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.5E-10136172IPR001471AP2/ERF domain
SMARTSM003808.0E-4136183IPR001471AP2/ERF domain
CDDcd000187.33E-11136172No hitNo description
PROSITE profilePS5103211.627314375IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-8316359IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-9317354IPR001471AP2/ERF domain
SMARTSM003800.0027317360IPR001471AP2/ERF domain
PfamPF008474.7E-5317357IPR001471AP2/ERF domain
CDDcd000182.59E-10317354No hitNo description
SMARTSM003802.8E-4410465IPR001471AP2/ERF domain
PfamPF008479.1E-6410454IPR001471AP2/ERF domain
PROSITE profilePS5103212.55410458IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-9411458IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-11413458IPR001471AP2/ERF domain
PROSITE profilePS5103212.405551611IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-8553598IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-9554592IPR001471AP2/ERF domain
CDDcd000186.66E-11554591No hitNo description
SMARTSM003804.0E-4554605IPR001471AP2/ERF domain
PROSITE profilePS5103212.497650714IPR001471AP2/ERF domain
SMARTSM003802.3E-4650705IPR001471AP2/ERF domain
PfamPF008472.9E-5650694IPR001471AP2/ERF domain
SuperFamilySSF541714.58E-9651699IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.1E-11653698IPR001471AP2/ERF domain
PROSITE profilePS5103212.352837894IPR001471AP2/ERF domain
PfamPF008473.3E-4839885IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-8839882IPR016177DNA-binding domain
CDDcd000187.88E-12840876No hitNo description
Gene3DG3DSA:3.30.730.107.1E-10840876IPR001471AP2/ERF domain
SMARTSM003804.6E-4840891IPR001471AP2/ERF domain
PfamPF008477.1E-5935980IPR001471AP2/ERF domain
SMARTSM003805.4E-5936991IPR001471AP2/ERF domain
PROSITE profilePS5103213.2619361000IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-9938985IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.7E-11939985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1146 aa     Download sequence    Send to blast
METEQVVLAD EKEQETSSCR KQMIAQVEQQ PELNVSEILV DKVMSSTPFQ YNQMDSSIDI  60
LGLHATVLKA QSSYSTNTTS GATESSKKKQ VFLDTVKEAS TGFNCNMQQS EANVDVTESS  120
NITTRTNTKA KKSLIGIRRQ KNGRYGAVIR DPIRHKQVWL GTFDTVEQAS KAIISKKSEF  180
DEKLSLQGNC KENKPKGNKK QKINQVSNSN LDAACESQER SSEVSVDKVK STTCFQDNHM  240
DSSIDILGLQ ATELKAQSSN STNNTTTAPE SIKEADGKEP PFIREISRVE LMANVRVTES  300
SGATTSINPN AKISLIGIRK QSSGRYAAVI TDRIRHKKVW LGTFDTIEEA SKAYFSKKSE  360
FDEKLSLLGN CTKKPKKNDD HIQPKSPVVA PSSVPNDQTS NTTSVGRTTH IIGVHKRKTS  420
GKYTSEITNP ISEKKIWLGT FGTAEEASQA YQSKKLEFQK IVKEKQQQQC NDNQAHDSKQ  480
DDKEKLVNVN KEGNENNSNS THSTATAAES SKKAKGKKPF IREISRVELM ANVHVTESSN  540
STTINPKAKR SLIGIRSQKN GRYGAFIKDP IRHKQVWLGT FDTVEQASEA YFSKKTEFEK  600
LSLQGNDKNR PKKNSHHIQP ESPDAASLSL PNNQTLNTSS VGTDSHKATH VVGVNKSKTT  660
GKYTSEITNP VTKKKIWLGT FGTAEEASQA YQSKKLEFQK LVKAKRQQQC SNEQTHDSKQ  720
DGKEKLGNVK QHGHENVNCE LFQPELAGGS ETEQVKSSTP FQHNQMESSI AISGLHATEL  780
KAQNAYSTNS TTAAESSNQA DGKKPFIREI SQVELTANVH VTESSNTTST NPKAKRSLIG  840
IRRQKNGRYG AVIRDPFRHK QVWLGTFDTV EEASEAIISK KAEFEKLSLQ GNKEKRPKRN  900
SSQIQPESPD GSSLSMPNNQ TSNAASVGID SHKTTRIVGV NKSKTTGKYT SEITNPINKK  960
KIWLGTFATA EEASQAYQSK KLEFQKLVKA KQQQQCINKQ TCSKQDAKEK LVSVKQEHED  1020
VDCQQFQPES TGGLEFDLPI SNLSTGGTDQ MIDSHNIGIA REDFHAYQFK KFDFQSSKNV  1080
ELQSDMPTDA KQQGQEDEDL SMEQWVQLPG DREVKFSQKL GLPIIDNYGS LLGEFSSLDD  1140
DLSICK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754472e-44HG975447.1 Solanum pennellii chromosome ch08, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM1AW610.0M1AW61_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000317510.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43411240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.23e-12ERF family protein