PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00074g00125.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 350aa    MW: 38945 Da    PI: 4.6209
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00074g00125.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83e-19135185155
                       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                               ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  Peaxi162Scf00074g00125.1 135 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 185
                               59********.**********72....45*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.28E-32135192No hitNo description
Gene3DG3DSA:3.30.730.101.2E-29136192IPR001471AP2/ERF domain
PfamPF008472.2E-12136185IPR001471AP2/ERF domain
PROSITE profilePS5103223.367136193IPR001471AP2/ERF domain
SMARTSM003804.1E-37136199IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-21136192IPR016177DNA-binding domain
PRINTSPR003673.8E-10137148IPR001471AP2/ERF domain
PRINTSPR003673.8E-10159175IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042991Biological Processtranscription factor import into nucleus
GO:0048364Biological Processroot development
GO:0048825Biological Processcotyledon development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MDQQSMLSSN RVKFTEHRKQ TTMVKPVPVT GRRKSVEMNG GIGPRVVRIT VTDADATDSS  60
DDEEGSIYSR QRVKKYVSEV RIEENDGNVR GVMVNATSQS TEAEAASALV PAKRRKKTNN  120
NNKGSVTRKV VNNGKKFRGV RQRPWGKWAA EIRDPLRRVR LWLGTYDTAE EAAMVYDNAA  180
IQLRGPDALT NFITPPVAAP KTSCSGCNSG DDESSHNEQR SPKSVLRCAS TSFEESQNNE  240
EAEAESLPSL PSEFRDENDI SKLSEGFCDF PSFESFFPNE LFSFENSVSI PDFDLFEPTT  300
LPDNIFGETF SRDMFVGSSN DFGFGSSSWP EEDYFQDIGD IFGSDPLMAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-20134192362ATERF1
3gcc_A7e-20134192362ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00027PBMTransfer from AT4G23750Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016452918.11e-165PREDICTED: ethylene-responsive transcription factor CRF2-like
TrEMBLA0A1S3YLI41e-163A0A1S3YLI4_TOBAC; ethylene-responsive transcription factor CRF2-like
STRINGXP_009763317.11e-164(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.24e-51cytokinin response factor 2