PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00071g01049.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family AP2
Protein Properties Length: 488aa    MW: 54691.7 Da    PI: 9.3715
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00071g01049.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.33.7e-084282145
                       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAaka 45
                              +g++GV  + + g++vA+Irdp     + k +++g+f t++eAa a
  Peaxi162Scf00071g01049.1 42 TGFTGVQ-KTRVGKFVARIRDPI----KkKMVHVGTFNTPQEAANA 82
                              6899**7.5568*********72....35***************98 PP
2AP228.34.5e-09103150253
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                               g  G++  k +gr+ A+I  p    ++ k+++lg+f t eeA +a+   + ++
  Peaxi162Scf00071g01049.1 103 GLVGIYKAK-NGRYCASITNP----IThKTVWLGTFHTVEEASQAYFSKKSEF 150
                               567999777.9******9997....247******************8776665 PP
3AP234.35.9e-11275314245
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAaka 45 
                               ++ GV   k +gr+++eI+dp     + k+++lg+f+taeeA +a
  Peaxi162Scf00071g01049.1 275 HIVGVGKSK-SGRFFSEIWDPI----NkKSIWLGTFDTAEEASQA 314
                               789999777.8*********72....35**************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103210.25743100IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-94393IPR016177DNA-binding domain
SMARTSM003800.00514398IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-94483IPR001471AP2/ERF domain
PROSITE profilePS5103210.244103162IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-8104148IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.0E-8106143IPR001471AP2/ERF domain
CDDcd000181.06E-12274315No hitNo description
PfamPF008473.2E-4275314IPR001471AP2/ERF domain
PROSITE profilePS5103213.208275335IPR001471AP2/ERF domain
SMARTSM003806.6E-6275329IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-10276323IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.8E-11278323IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    Send to blast
METNQEKLVE ENESSKKKTE SCVCENNVKF TPFQYNVRYN ATGFTGVQKT RVGKFVARIR  60
DPIKKKMVHV GTFNTPQEAA NAFLLKKQVF LDTHQYVKKP SKGLVGIYKA KNGRYCASIT  120
NPITHKTVWL GTFHTVEEAS QAYFSKKSEF EKLVQVNRGK EPIICVESSK EASCLMASVR  180
GTKSSNRCIY TVTSYPKAKR SLLRTRGQKN GWNADVVRDL IRCEKRLLGT SNTKNCDQIE  240
TESPVGASLS VDNDQALNVA SVGRNKTTSS HETTHIVGVG KSKSGRFFSE IWDPINKKSI  300
WLGTFDTAEE ASQAFQSKKL EFQKLVKAKQ QYNRQTHSSA REKQDGKVKF VNIKQGQETV  360
NLEGFQLKSA CGTSYVEIDI PLTNSSEGES DQRIDSHEIS HSMGVQMRKS GIGTSDSLLG  420
TLSTAEEDSN AYQCKKMDFE RSKKAELQNN MPTGPCAGEK QECQEDEDLW KGQWVQVPVN  480
EGLLHMPQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009771233.11e-117PREDICTED: uncharacterized protein LOC104221795
TrEMBLA0A1U7VXX51e-116A0A1U7VXX5_NICSY; uncharacterized protein LOC104221795
STRINGXP_009771233.11e-116(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43411240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.21e-11ERF family protein