PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00071g01020.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family AP2
Protein Properties Length: 812aa    MW: 89253.8 Da    PI: 9.1989
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00071g01020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2271.1e-08177218953
                       AP2   9 dkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                               ++k+gr+ ++I+dp    +r k ++lg+f+taeeA +a+   + ++
  Peaxi162Scf00071g01020.1 177 RRKSGRYGSSIKDP----IRqKAVWLGTFDTAEEASEAYFSKKSEF 218
                               6669*********7....347******************8776665 PP
2AP227.48.5e-09397441553
                       AP2   5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                               G++++k +gr+ A I dp     + k ++lg+f+t eeA +a+   + ++
  Peaxi162Scf00071g01020.1 397 GIHRRK-SGRYGAAITDPI----KhKEVWLGTFDTVEEASEAYFSKKSEF 441
                               899888.7*********72....46******************8776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.7E-575117IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.6E-583112IPR001471AP2/ERF domain
CDDcd000181.53E-11170211No hitNo description
SMARTSM003802.4E-4171233IPR001471AP2/ERF domain
PROSITE profilePS5103213.261171229IPR001471AP2/ERF domain
SuperFamilySSF541714.32E-9172217IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.9E-11173211IPR001471AP2/ERF domain
PROSITE profilePS5103210.376296335IPR001471AP2/ERF domain
SMARTSM003800.0052296350IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-6299337IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.7E-7300335IPR001471AP2/ERF domain
SMARTSM003806.1E-4394442IPR001471AP2/ERF domain
PROSITE profilePS5103211.917394451IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-9396440IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.1E-10397434IPR001471AP2/ERF domain
CDDcd000182.12E-11397434No hitNo description
Gene3DG3DSA:3.30.730.105.2E-4496528IPR001471AP2/ERF domain
SMARTSM003800.0016591645IPR001471AP2/ERF domain
PROSITE profilePS5103210.586591651IPR001471AP2/ERF domain
SuperFamilySSF541714.51E-8592639IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.3E-8594638IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 812 aa     Download sequence    Send to blast
METLESVEEA SKGFNSNMDE SEKLVKVYQG KEPTVCVQSP KEASRLMPND DAKRSSEGCI  60
NVVTRNSETK RNLLGTQRLK CRRCGSKIRQ HRRHKRVRLG TFDTGEEASE AYFSKKSEFE  120
KLEKVKTGKK PIVCLESSKE ASSVVANVHG AKSSDGCIDS TVTSNPQAKK NLRGAQRRKS  180
GRYGSSIKDP IRQKAVWLGT FDTAEEASEA YFSKKSEFEK LTKVNLGEEL IKCVQSPEQA  240
SCLMANNLGT KSSKGCVNVV TGNPEQASCL MANDLGTKSP VGCINVVTSN TEAKRNLLGT  300
KRLKSGRYGA AIQDPITHKQ VWLGTFDTSE EASEACFSKK SEFEILEKVN TGKKPICVES  360
SKEASSLVAN VHGAKSSDGC INSSVTSNPK ATRSLLGIHR RKSGRYGAAI TDPIKHKEVW  420
LGTFDTVEEA SEAYFSKKSE FEKLTKVNQG EELIKCVPSP EQASCLMAND LGTKSPVGCI  480
NVVTSNTEAK RNLPGTKRLK SGRYGAAIQD PITHNQVWLG TSDTVEEAFF SKKSEFEKLS  540
KGNKENKSKN SVQIQPQSPV GALLSVDNDQ ILATASLGKR NKRIVSHRTT HIIGAHKKKS  600
GKYYSVITNP ISKKRIRLGT FVSAEEAAQA YRSKKLEFQK LVEAKQQCNR RTHVSEREKQ  660
DEKEKLVDVK QGHGTVNLEG FQPESASGAL WSEIDVPMSN SSDGGSEQRI DLLEISHSMG  720
VEMRKSGKYS SEGEEAVHAY QCKKLESERS KKAELQSIIP TDSSAGGSQE SEEDEDLWMG  780
QWVQLPGDIK EVKFSLKLGL PIIDNYGCLL VC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019231375.10.0PREDICTED: uncharacterized protein LOC109212195 isoform X2
TrEMBLA0A1J6J9X40.0A0A1J6J9X4_NICAT; Uncharacterized protein
STRINGXP_009771233.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43411240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-12ERF family protein