PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00071g00172.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 197aa    MW: 22230.7 Da    PI: 4.545
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00071g00172.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-194089255
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                               y+GVr++  +g+WvAeIr+p   + r +r++lg+f t  eAa+a++ a+++l+g
  Peaxi162Scf00071g00172.1 40 TYRGVRQRT-WGKWVAEIREP---N-RgARIWLGTFNTSIEAARAYDDAARRLYG 89
                              69****999.**********8...3.35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.54E-193999No hitNo description
Gene3DG3DSA:3.30.730.102.3E-304099IPR001471AP2/ERF domain
SMARTSM003802.8E-3440103IPR001471AP2/ERF domain
PROSITE profilePS5103221.8914097IPR001471AP2/ERF domain
SuperFamilySSF541714.32E-214097IPR016177DNA-binding domain
PfamPF008476.8E-144089IPR001471AP2/ERF domain
PRINTSPR003672.3E-104152IPR001471AP2/ERF domain
PRINTSPR003672.3E-106379IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MAESVETISV GEKPCKKSTV GRSRKGCMRG KGGPENALCT YRGVRQRTWG KWVAEIREPN  60
RGARIWLGTF NTSIEAARAY DDAARRLYGP DAKLNLSESA EQLVNSEENF NCMENNIESG  120
ESCSVLDEAS IFKDGNGKYL VWETPAPSLL DEQEHNLMSG VEFPKEFDWA NEGEMNIDFE  180
GNDFYDQFSS KNFLFHM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-164196359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00519DAPTransfer from AT5G18450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016574802.12e-76PREDICTED: dehydration-responsive element-binding protein 2C-like
TrEMBLA0A1U8GU744e-75A0A1U8GU74_CAPAN; Dehydration-responsive element-binding protein 2D
TrEMBLA0A2G2Y7M74e-75A0A2G2Y7M7_CAPAN; dehydration-responsive element-binding protein 2C-like
STRINGXP_009630729.11e-72(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31552247
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.12e-39ERF family protein