PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00071g00088.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bZIP | ||||||||
Protein Properties | Length: 397aa MW: 43423.4 Da PI: 6.8636 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.1 | 2.6e-15 | 192 | 247 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v + eN++L k+l +++++ + Peaxi162Scf00071g00088.1 192 DVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQVRVENSSLLKRLTDISQKYNE 247 579*****************************************999999998875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.4E-12 | 186 | 245 | No hit | No description |
SMART | SM00338 | 9.6E-19 | 190 | 254 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.254 | 192 | 247 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.4E-13 | 193 | 245 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.33E-11 | 194 | 244 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 197 | 212 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 8.3E-38 | 261 | 385 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 397 aa Download sequence Send to blast |
MMNRSSSEWT FQQFLKEATV AVDSTSTSSH QIKDQSLNHN NNNLIANQSK PISEPPSFGS 60 EPPMTNIPID SDEYQALLKR RLDLACAAFA LTRANCVKPQ DSATLLPEKG SLTANAASQA 120 GSQVPPKGSG QELAQVQDKD VAGLVGIPPL PAVQKKPGIQ VRSTTSGSSG EQSDDDEAEG 180 EAETTQQTDP TDVKRVRRML SNRESARRSR RRKQAHLTEL ETQVSQVRVE NSSLLKRLTD 240 ISQKYNESAV DNRVLKADVE TLRAKVKMAE ETVKRVTGLN PLFQAMSEIS TMMMPSFTGS 300 PFDSSADAAV PEHVGPKSHY YQAPENSHMP ILDHRMQNGM LDIHPVGNVQ QNPTTEAIGG 360 NKIDRTSSMH RVASLEHLQK RIRGEGGTSA TQCTEQQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 206 | 213 | RRSRRRKQ |
2 | 208 | 213 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019229939.1 | 0.0 | PREDICTED: light-inducible protein CPRF2-like isoform X2 | ||||
Swissprot | Q99090 | 1e-135 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
TrEMBL | A0A314KKK6 | 0.0 | A0A314KKK6_NICAT; Basic leucine zipper 63 | ||||
STRING | XP_009787496.1 | 1e-177 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2934 | 24 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 1e-66 | bZIP family protein |
Publications ? help Back to Top | |||
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