PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00068g02115.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family B3
Protein Properties Length: 334aa    MW: 38914.5 Da    PI: 4.7392
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00068g02115.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.31.2e-1251134183
                               EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                               f k+l   dv++s  +++ k+ ae+h   + + +sk+l +ed++g+ +++++ +r + g y++++GW+++ ++++L+  D +  +
  Peaxi162Scf00068g02115.1  51 FTKILCETDVGESFSVSILKEDAEDHlpHLAPGKSKMLEFEDTRGNNFSMEF-VRSNLGDYYFSTGWERYRDEHKLRYDDLLSVY 134
                               8999************************889999******************.7899999********************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.4E-1548139IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.12E-1349135IPR015300DNA-binding pseudobarrel domain
CDDcd100174.55E-1151138No hitNo description
PfamPF023621.6E-951134IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.7E-5183280IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.51E-5195280IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MTKRQLNEEE EEEGESEDSH VSKKQNPTPV STSREKKTQE NTRNDYVKLV FTKILCETDV  60
GESFSVSILK EDAEDHLPHL APGKSKMLEF EDTRGNNFSM EFVRSNLGDY YFSTGWERYR  120
DEHKLRYDDL LSVYKKEKQN GVDDDQRYFY IIECQKVTPQ HPTKLFLTHV EFVLAKLLAA  180
LEDPKSSVEK ETVLAKLLCD QDLYGNSKGL KLQKNEVEEN LNERPLARAG GKITLPLFDP  240
IEKKLFQMEL VYTDEEEYYI GFGWKEYAAE HNLLTFDTIF VNKIFVNRDV VNHRSAKFIW  300
DKDIDDDQLI NNSYYYEIIY QKVSSPPSST SATG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009799396.11e-108PREDICTED: uncharacterized protein LOC104245480
TrEMBLA0A314L7501e-108A0A314L750_NICAT; Uncharacterized protein
STRINGXP_009799396.11e-107(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1631025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.22e-07related to ABI3/VP1 2